Chemical elements
  Magnesium
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    Chemical Properties
    PDB 101d-1atr
      101d
      109d
      119d
      121p
      13pk
      146d
      150d
      159d
      184d
      1a05
      1a2b
      1a2k
      1a49
      1a4r
      1a5u
      1a6e
      1a73
      1a77
      1a82
      1a95
      1a96
      1aa1
      1aa9
      1aax
      1af6
      1agp
      1agr
      1ai3
      1aig
      1aih
      1aij
      1ajb
      1ajc
      1ajd
      1ali
      1alj
      1alk
      1am4
      1am9
      1amu
      1an0
      1ao0
      1aon
      1aor
      1aox
      1aq2
      1aqf
      1ar1
      1as0
      1atr
    PDB 1ats-1bup
    PDB 1bvw-1cp8
    PDB 1cqi-1d9d
    PDB 1d9z-1dxe
    PDB 1dxf-1ed9
    PDB 1edr-1f2u
    PDB 1f3f-1fmw
    PDB 1fnm-1g8n
    PDB 1g8t-1gtv
    PDB 1gua-1hnz
    PDB 1hpm-1i95
    PDB 1i96-1iv2
    PDB 1iv3-1jgy
    PDB 1jgz-1k01
    PDB 1k02-1kil
    PDB 1kiz-1l3p
    PDB 1l3r-1lvh
    PDB 1lvk-1mn9
    PDB 1mnd-1n33
    PDB 1n52-1ngg
    PDB 1ngj-1ntb
    PDB 1nu4-1o93
    PDB 1o9t-1ouo
    PDB 1ouq-1pg4
    PDB 1php-1q54
    PDB 1q5h-1qgx
    PDB 1qh1-1r4a
    PDB 1r4x-1rqy
    PDB 1rrf-1s9j
    PDB 1sa0-1svm
    PDB 1svs-1te6
    PDB 1tez-1u0c
    PDB 1u0h-1uhx
    PDB 1uik-1vc9
    PDB 1vcl-1vsd
    PDB 1vst-1wax
    PDB 1wb1-1wzn
    PDB 1x06-1xg4
    PDB 1xhf-1xqa
    PDB 1xr1-1y84
    PDB 1y8a-1yns
    PDB 1yq2-1z0a
    PDB 1z0d-1zc4
    PDB 1zca-1zvq
    PDB 1zvw-2a5l
    PDB 2a5y-2anr
    PDB 2anv-2b8q
    PDB 2b8r-2bku
    PDB 2bm0-2c18
    PDB 2c19-2cic
    PDB 2cie-2d0q
    PDB 2d1k-2dw6
    PDB 2dw7-2egh
    PDB 2eh3-2f6t
    PDB 2f6v-2fmh
    PDB 2fmk-2g3h
    PDB 2g3s-2gl5
    PDB 2gl6-2h7v
    PDB 2h7x-2hne
    PDB 2hny-2i34
    PDB 2i3d-2io7
    PDB 2io8-2j3e
    PDB 2j3q-2jg1
    PDB 2jg2-2nvu
    PDB 2nvx-2oem
    PDB 2ofw-2our
    PDB 2ous-2pcl
    PDB 2pda-2px3
    PDB 2pxi-2q5z
    PDB 2q66-2qlx
    PDB 2qm1-2qwy
    PDB 2qx0-2rdr
    PDB 2rds-2uxq
    PDB 2uxr-2vbn
    PDB 2vbu-2vk8
    PDB 2vkf-2w7x
    PDB 2w83-2wi3
    PDB 2wia-2wzd
    PDB 2wzg-2xcp
    PDB 2xdg-2y0s
    PDB 2y3p-2z4r
    PDB 2z4s-2zjy
    PDB 2zkj-301d
    PDB 302d-3a5k
    PDB 3a5l-3ak8
    PDB 3ak9-3bb3
    PDB 3bb4-3bsu
    PDB 3btx-3c95
    PDB 3c9h-3ckg
    PDB 3clc-3cxc
    PDB 3cxo-3der
    PDB 3des-3du3
    PDB 3du7-3e84
    PDB 3e8m-3eni
    PDB 3eno-3ezw
    PDB 3ezx-3fcs
    PDB 3fct-3fqr
    PDB 3fqt-3g3y
    PDB 3g45-3gj3
    PDB 3gj4-3gve
    PDB 3gvn-3hdz
    PDB 3hfw-3hrz
    PDB 3hs0-3hzt
    PDB 3hzv-3iaf
    PDB 3iak-3ilo
    PDB 3imd-3jvt
    PDB 3jvv-3ka6
    PDB 3ka8-3kkp
    PDB 3kkq-3kxi
    PDB 3kxo-3ldw
    PDB 3lee-3lwm
    PDB 3lwn-3mey
    PDB 3mf4-3n23
    PDB 3n2a-3nkv
    PDB 3nl3-3ocm
    PDB 3ocu-3oiu
    PDB 3oiv-3oye
    PDB 3oyf-3pu9
    PDB 3pwx-3rmj
    PDB 3ro8-3t3p
    PDB 3t5t-3ukd
    PDB 3umm-3v9w
    PDB 3v9x-412d
    PDB 421p-4aov
    PDB 4ap5-4dg1
    PDB 4dh1-4dug
    PDB 4dwd-4en4
    PDB 4en5-4fk1
    PDB 4fkx-8ici
    PDB 8ruc-9rub

Magnesium in PDB, part 1 (1-50), PDB files 101d - 1atr






Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms.
PDB files 1-50 (101d - 1atr):
  1. 101d - Refinement of Netropsin Bound to Dna: Bias and Feedback in Electron Density Map Interpretation
  2. 109d - Variability in Dna Minor Groove Width Recognised By Ligand Binding: The Crystal Structure of A Bis-Benzimidazole Compound Bound to the Dna Duplex D(Cgcgaattcgcg)2
  3. 119d - Crystal and Molecular Structure of D(Cgtagatctacg) At 2.25 Angstroms Resolution
  4. 121p - Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C- Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras
  5. 13pk - Ternary Complex of Phosphoglycerate Kinase From Trypanosoma Brucei
  6. 146d - Solution Structure of the Mithramycin Dimer-Dna Complex
  7. 150d - Guanine.1,N6-Ethenoadenine Base-Pairs in the Crystal Structure of D(Cgcgaatt(Eda)Gcg)
  8. 159d - Side By Side Binding Of Two Distamycin A Drugs in the Minor Groove of An Alternating B-Dna Duplex
  9. 184d - Self-Association Of A Dna Loop Creates A Quadruplex: Crystal Structure of D(Gcatgct) At 1.8 Angstroms Resolution
  10. 1a05 - Crystal Structure Of the Complex of 3-Isopropylmalate Dehydrogenase From Thiobacillus Ferrooxidans With 3- Isopropylmalate
  11. 1a2b - Human Rhoa Complexed With Gtp Analogue
  12. 1a2k - Gdpran-NTF2 Complex
  13. 1a49 - Bis Mg-Atp-K-Oxalate Complex of Pyruvate Kinase
  14. 1a4r - G12V Mutant of Human Placental CDC42 Gtpase in the Gdp Form
  15. 1a5u - Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
  16. 1a6e - Thermosome-Mg-Adp-ALF3 Complex
  17. 1a73 - Intron-Encoded Endonuclease I-Ppoi Complexed With Dna
  18. 1a77 - Flap Endonuclease-1 From Methanococcus Jannaschii
  19. 1a82 - Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp and Diaminopelargonic Acid
  20. 1a95 - Xprtase From E. Coli Complexed With Mg:Cprpp and Guanine
  21. 1a96 - Xprtase From E. Coli With Bound Cprpp and Xanthine
  22. 1aa1 - Activated Spinach Rubisco in Complex With the Product 3- Phosphoglycerate
  23. 1aa9 - Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure
  24. 1aax - Crystal Structure of Protein Tyrosine Phosphatase 1B Complexed With Two Bis(Para-Phosphophenyl)Methane (Bppm) Molecules
  25. 1af6 - Maltoporin Sucrose Complex
  26. 1agp - Three-Dimensional Structures And Properties Of A Transforming and A Nontransforming Gly-12 Mutant of P21-H- Ras
  27. 1agr - Complex of ALF4-Activated Gi-Alpha-1 With RGS4
  28. 1ai3 - Orbital Steering in the Catalytic Power of Enzymes: Small Structural Changes With Large Catalytic Consequences
  29. 1aig - Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the D+Qb-Charge Separated State
  30. 1aih - Catalytic Domain of Bacteriophage HP1 Integrase
  31. 1aij - Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
  32. 1ajb - Three-Dimensional Structure Of the D153G Mutant of E. Coli Alkaline Phosphatase: A Mutant With Weaker Magnesium Binding and Increased Catalytic Activity
  33. 1ajc - Three-Dimensional Structure Of the D153G Mutant of E. Coli Alkaline Phosphatase: A Mutant With Weaker Magnesium Binding and Increased Catalytic Activity
  34. 1ajd - Three-Dimensional Structure Of the D153G Mutant of E. Coli Alkaline Phosphatase: A Mutant With Weaker Magnesium Binding and Increased Catalytic Activity
  35. 1ali - Alkaline Phosphatase Mutant (H412N)
  36. 1alj - Alkaline Phosphatase Mutant (H412N)
  37. 1alk - Reaction Mechanism of Alkaline Phosphatase Based on Crystal Structures. Two Metal Ion Catalysis
  38. 1am4 - Complex Between CDC42HS.Gmppnp and P50 Rhogap (H. Sapiens)
  39. 1am9 - Human Srebp-1A Bound to Ldl Receptor Promoter
  40. 1amu - Phenylalanine Activating Domain of Gramicidin Synthetase 1 in A Complex With Amp and Phenylalanine
  41. 1an0 - CDC42HS-Gdp Complex
  42. 1ao0 - Glutamine Phosphoribosylpyrophosphate (Prpp) Amidotransferase From B. Subtilis Complexed With Adp and Gmp
  43. 1aon - Crystal Structure of the Asymmetric Chaperonin Complex Groel/Groes/(Adp)7
  44. 1aor - Structure of A Hyperthermophilic Tungstopterin Enzyme, Aldehyde Ferredoxin Oxidoreductase
  45. 1aox - I Domain From Integrin ALPHA2-BETA1
  46. 1aq2 - Phosphoenolpyruvate Carboxykinase
  47. 1aqf - Pyruvate Kinase From Rabbit Muscle With Mg, K, and L- Phospholactate
  48. 1ar1 - Structure At 2.7 Angstrom Resolution of the Paracoccus Denitrificans Two-Subunit Cytochrome C Oxidase Complexed With An Antibody Fv Fragment
  49. 1as0 - Gtp-Gamma-S Bound G42V GIA1
  50. 1atr - Threonine 204 Of The Chaperone Protein HSC70 Influences The Structure of the Active Site But Is Not Essential For Atp Hydrolysis


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Magnesium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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