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Magnesium in PDB 4cgk: Crystal Structure of the Essential Protein Pcsb From Streptococcus Pneumoniae

Protein crystallography data

The structure of Crystal Structure of the Essential Protein Pcsb From Streptococcus Pneumoniae, PDB code: 4cgk was solved by S.G.Bartual, D.Straume, G.A.Stamsas, C.Alfonso, M.Martinez-Ripoll, L.S.Havarstein, J.A.Hermoso, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.63 / 2.55
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 125.815, 125.815, 126.637, 90.00, 90.00, 120.00
R / Rfree (%) 23.761 / 27.173

Other elements in 4cgk:

The structure of Crystal Structure of the Essential Protein Pcsb From Streptococcus Pneumoniae also contains other interesting chemical elements:

Chlorine (Cl) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Essential Protein Pcsb From Streptococcus Pneumoniae (pdb code 4cgk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Essential Protein Pcsb From Streptococcus Pneumoniae, PDB code: 4cgk:

Magnesium binding site 1 out of 1 in 4cgk

Go back to Magnesium Binding Sites List in 4cgk
Magnesium binding site 1 out of 1 in the Crystal Structure of the Essential Protein Pcsb From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Essential Protein Pcsb From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1393

b:75.7
occ:1.00
O B:HOH2186 2.2 48.0 1.0
OG1 B:THR368 3.0 50.0 1.0
O B:HOH2166 3.3 63.6 1.0
NE2 B:HIS372 3.4 51.6 1.0
CA B:GLY370 3.6 51.8 1.0
CE1 B:HIS372 3.7 51.0 1.0
N B:GLY370 3.9 51.4 1.0
O B:ILE369 3.9 52.7 1.0
C B:ILE369 4.0 51.2 1.0
CD2 B:HIS372 4.0 52.1 1.0
C B:GLY370 4.1 52.6 1.0
O B:THR368 4.1 48.9 1.0
CB B:THR368 4.2 50.0 1.0
ND1 B:HIS372 4.3 51.4 1.0
N B:ASN371 4.3 53.6 1.0
C B:THR368 4.4 49.5 1.0
O B:ASN371 4.5 55.2 1.0
O B:HOH2167 4.5 42.6 1.0
CG B:HIS372 4.5 51.7 1.0
OD1 B:ASN366 4.6 47.2 1.0
O B:GLY370 4.7 52.6 1.0
C B:ASN371 4.9 54.3 1.0
N B:ILE369 4.9 50.6 1.0
ND2 B:ASN366 4.9 49.4 1.0
CG B:ASN366 4.9 48.6 1.0
CA B:THR368 4.9 49.5 1.0
CA B:ILE369 5.0 50.4 1.0

Reference:

S.G.Bartual, D.Straume, G.A.Stamsas, I.G.Munoz, C.Alfonso, M.Martinez-Ripoll, L.S.Havarstein, J.A.Hermoso. Structural Basis of Pcsb-Mediated Cell Separation in Streptococcus Pneumoniae. Nat.Commun. V. 5 3842 2014.
ISSN: ISSN 2041-1723
PubMed: 24804636
DOI: 10.1038/NCOMMS4842
Page generated: Mon Dec 14 11:40:20 2020

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