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Magnesium in PDB 4egw: The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii

Protein crystallography data

The structure of The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii, PDB code: 4egw was solved by A.Guskov, N.Nordin, A.Reynaud, H.Engman, A.-K.Lundback, A.J.O.Jong, T.Cornvik, T.Phua, S.Eshaghi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.69 / 2.50
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 68.290, 68.290, 241.940, 90.00, 90.00, 120.00
R / Rfree (%) 15.3 / 19.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii (pdb code 4egw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii, PDB code: 4egw:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 4egw

Go back to Magnesium Binding Sites List in 4egw
Magnesium binding site 1 out of 3 in the The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg313

b:60.4
occ:1.00
OD1 A:ASP163 3.6 86.2 1.0
OE1 A:GLU159 4.1 0.3 1.0
CG A:ASP163 4.5 93.4 1.0
OD2 A:ASP163 4.6 97.4 1.0
O A:GLU159 4.8 93.2 1.0
CD A:GLU159 5.0 0.3 1.0

Magnesium binding site 2 out of 3 in 4egw

Go back to Magnesium Binding Sites List in 4egw
Magnesium binding site 2 out of 3 in the The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg314

b:63.8
occ:1.00
O A:HOH448 3.0 66.0 1.0
OD2 A:ASP163 3.3 97.4 1.0
CG A:ASP163 4.4 93.4 1.0
CB A:ASP163 4.9 96.2 1.0

Magnesium binding site 3 out of 3 in 4egw

Go back to Magnesium Binding Sites List in 4egw
Magnesium binding site 3 out of 3 in the The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Structure of the Soluble Domain of Cora From Methanocaldococcus Jannaschii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg307

b:61.2
occ:1.00
CB B:ASP163 3.5 71.6 1.0
OD2 B:ASP163 3.8 77.2 1.0
CG B:ASP163 4.2 71.9 1.0
CA B:ASP163 4.8 70.5 1.0
C B:ASP163 5.0 66.8 1.0

Reference:

A.Guskov, N.Nordin, A.Reynaud, H.Engman, A.K.Lundback, A.J.Jong, T.Cornvik, T.Phua, S.Eshaghi. Structural Insights Into the Mechanisms of MG2+ Uptake, Transport, and Gating By Cora Proc.Natl.Acad.Sci.Usa V. 109 18459 2012.
ISSN: ISSN 0027-8424
PubMed: 23091000
DOI: 10.1073/PNAS.1210076109
Page generated: Fri Aug 16 14:30:35 2024

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