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Magnesium in PDB 4osl: Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine

Protein crystallography data

The structure of Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine, PDB code: 4osl was solved by D.Deng, J.P.Wu, C.Y.Yan, X.J.Pan, N.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.55 / 2.45
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 81.530, 87.609, 87.843, 90.00, 102.72, 90.00
R / Rfree (%) 22.5 / 24.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine (pdb code 4osl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine, PDB code: 4osl:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4osl

Go back to Magnesium Binding Sites List in 4osl
Magnesium binding site 1 out of 2 in the Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg801

b:65.3
occ:1.00
O B:HOH987 1.9 48.7 1.0
O B:HOH1025 2.2 34.4 1.0
O H:HOH102 2.4 68.3 1.0
OD1 B:ASN504 3.2 31.6 1.0
O B:HOH1031 4.2 37.1 1.0
OD2 B:ASP573 4.3 26.1 1.0
CG B:ASN504 4.5 32.7 1.0
N7 H:DG-11 4.5 37.1 1.0
OD1 B:ASP573 4.5 27.4 1.0
N6 H:DA-10 4.6 35.6 1.0
N7 H:DA-10 4.7 37.8 1.0
C8 H:DG-11 4.8 37.3 1.0
CG B:ASP573 4.9 27.2 1.0

Magnesium binding site 2 out of 2 in 4osl

Go back to Magnesium Binding Sites List in 4osl
Magnesium binding site 2 out of 2 in the Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Tal Effector Reveals the Recognition Between Histidine and Guanine within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg101

b:81.1
occ:1.00
O J:HOH213 1.5 31.6 1.0
O J:HOH217 2.1 49.6 1.0
O I:HOH126 2.2 46.3 1.0
O A:HOH804 2.2 21.7 1.0
O A:HOH931 3.3 61.3 1.0
N7 J:DG-2 3.9 31.4 1.0
O6 J:DG-1 4.0 31.3 1.0
OD2 A:ASP301 4.0 29.4 1.0
O6 J:DG-2 4.0 31.9 1.0
O J:HOH201 4.2 33.1 1.0
O4 I:DT0 4.2 26.1 1.0
N4 I:DC1 4.5 22.4 1.0
C5 J:DG-2 4.5 31.3 1.0
C6 J:DG-2 4.6 31.7 1.0
C8 J:DG-2 4.9 32.3 1.0

Reference:

D.Deng, C.Y.Yan, J.P.Wu, X.J.Pan, N.Yan. Revisiting the Tale Repeat Protein Cell V. 5 297 2014.
ISSN: ISSN 1674-800X
PubMed: 24622844
DOI: 10.1007/S13238-014-0035-2
Page generated: Tue Aug 20 00:59:22 2024

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