Magnesium in PDB 6lzs: W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose.

Protein crystallography data

The structure of W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose., PDB code: 6lzs was solved by Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.87 / 2.00
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 59.651, 80.379, 112.777, 90.19, 89.89, 79.08
R / Rfree (%) 21.4 / 28.2

Other elements in 6lzs:

The structure of W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose. also contains other interesting chemical elements:

Calcium (Ca) 11 atoms
Chlorine (Cl) 7 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose. (pdb code 6lzs). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose., PDB code: 6lzs:

Magnesium binding site 1 out of 1 in 6lzs

Go back to Magnesium Binding Sites List in 6lzs
Magnesium binding site 1 out of 1 in the W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg605

b:31.7
occ:1.00
O C:HOH769 2.1 24.6 1.0
O C:HOH778 2.1 24.9 1.0
O C:HOH932 2.4 32.5 1.0
O C:HOH746 2.5 30.9 1.0
O C:ALA81 4.0 25.0 1.0
OD2 C:ASP86 4.2 23.9 1.0
ND1 C:HIS144 4.3 34.4 1.0
OD1 C:ASP86 4.4 24.2 1.0
OG1 C:THR83 4.4 25.5 1.0
CG C:ASP86 4.6 26.7 1.0
CB C:HIS144 4.8 24.0 1.0
CB C:ASP85 4.8 34.2 1.0
OE1 C:GLU80 5.0 46.4 1.0

Reference:

Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta. Structural Insight Into Chitin-Specific Solute-Binding Protein From Vibrio Harveyi To Be Published.
Page generated: Wed Mar 3 14:52:38 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy