Magnesium in PDB 6n7i: Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna)

Enzymatic activity of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna)

Magnesium Binding Sites:

Magnesium binding site 1 out of 4 in 6n7i

Magnesium Binding Sites List in 6n7i

Magnesium binding site 1 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg701 b:37.8 occ:1.00 O1B B:TTP700 2.2 38.3 1.0 O1G B:TTP700 2.2 38.3 1.0 OG B:SER319 2.2 34.0 1.0 OE1 B:GLN343 2.2 48.0 1.0 CD B:GLN343 2.9 48.0 1.0 NE2 B:GLN343 2.9 48.0 1.0 CB B:SER319 3.3 34.0 1.0 PB B:TTP700 3.4 38.3 1.0 PG B:TTP700 3.5 38.3 1.0 O2A B:TTP700 3.7 38.3 1.0 O3B B:TTP700 3.8 38.3 1.0 O3A B:TTP700 4.1 38.3 1.0 N B:SER319 4.2 34.0 1.0 CA B:SER319 4.3 34.0 1.0 CG B:GLN343 4.4 48.0 1.0 O2G B:TTP700 4.4 38.3 1.0 O3G B:TTP700 4.5 38.3 1.0 PA B:TTP700 4.5 38.3 1.0 O2B B:TTP700 4.6 38.3 1.0 OD2 B:ASP424 4.6 42.5 1.0 OD1 B:ASP424 4.8 42.5 1.0 CB B:GLN343 5.0 48.0 1.0

Magnesium binding site 2 out of 4 in 6n7i

Magnesium Binding Sites List in 6n7i

Magnesium binding site 2 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna) within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg701 b:25.9 occ:1.00 NE2 C:GLN343 2.2 34.8 1.0 O1G C:TTP700 2.2 24.3 1.0 OG C:SER319 2.3 23.2 1.0 OE1 C:GLN343 2.3 34.8 1.0 O1B C:TTP700 2.3 24.3 1.0 CD C:GLN343 2.5 34.8 1.0 CB C:SER319 3.3 23.2 1.0 PB C:TTP700 3.6 24.3 1.0 PG C:TTP700 3.6 24.3 1.0 O2A C:TTP700 3.9 24.3 1.0 O3B C:TTP700 3.9 24.3 1.0 CG C:GLN343 4.0 34.8 1.0 OD1 C:ASP424 4.1 31.5 1.0 O3A C:TTP700 4.3 24.3 1.0 CG C:LYS318 4.4 23.2 1.0 O2G C:TTP700 4.4 24.3 1.0 CA C:SER319 4.5 23.2 1.0 N C:SER319 4.5 23.2 1.0 OD2 C:ASP424 4.6 31.5 1.0 O3G C:TTP700 4.6 24.3 1.0 PA C:TTP700 4.7 24.3 1.0 O2B C:TTP700 4.7 24.3 1.0 CG C:ASP424 4.7 31.5 1.0 CB C:GLN343 4.9 34.8 1.0 CD C:LYS318 5.0 23.2 1.0

Magnesium binding site 3 out of 4 in 6n7i

Magnesium Binding Sites List in 6n7i

Magnesium binding site 3 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna) within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg701 b:27.3 occ:1.00 O2G D:TTP700 2.3 24.3 1.0 O2B D:TTP700 2.3 24.3 1.0 OE1 D:GLN343 2.5 37.6 1.0 OG D:SER319 2.8 24.8 1.0 CD D:GLN343 3.4 37.6 1.0 CB D:SER319 3.4 24.8 1.0 OD1 D:ASP424 3.6 37.7 1.0 NE2 D:GLN343 3.6 37.6 1.0 PG D:TTP700 3.7 24.3 1.0 PB D:TTP700 3.7 24.3 1.0 O3B D:TTP700 4.0 24.3 1.0 N D:SER319 4.2 24.8 1.0 O2A D:TTP700 4.2 24.3 1.0 NZ D:LYS318 4.3 23.8 1.0 CA D:SER319 4.4 24.8 1.0 CG D:ASP424 4.4 37.7 1.0 OD2 D:ASP424 4.5 37.7 1.0 O3G D:TTP700 4.5 24.3 1.0 O1B D:TTP700 4.6 24.3 1.0 O1G D:TTP700 4.6 24.3 1.0 O3A D:TTP700 4.7 24.3 1.0 CG D:GLN343 4.8 37.6 1.0

Magnesium binding site 4 out of 4 in 6n7i

Magnesium Binding Sites List in 6n7i

Magnesium binding site 4 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (GP4(5)-Dna) within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg701 b:40.6 occ:1.00 O2B E:TTP700 2.2 37.3 1.0 OE1 E:GLN343 2.3 49.4 1.0 O2G E:TTP700 2.4 37.3 1.0 OG E:SER319 2.6 36.1 1.0 CD E:GLN343 3.0 49.4 1.0 NE2 E:GLN343 3.1 49.4 1.0 PB E:TTP700 3.6 37.3 1.0 CB E:SER319 3.6 36.1 1.0 PG E:TTP700 3.7 37.3 1.0 OD2 E:ASP424 4.0 45.4 1.0 O3B E:TTP700 4.0 37.3 1.0 OD1 E:ASP424 4.2 45.4 1.0 O3G E:TTP700 4.3 37.3 1.0 O2A E:TTP700 4.3 37.3 1.0 CG E:GLN343 4.4 49.4 1.0 CG E:ASP424 4.5 45.4 1.0 O1B E:TTP700 4.5 37.3 1.0 N E:SER319 4.5 36.1 1.0 O3A E:TTP700 4.6 37.3 1.0 NZ E:LYS318 4.7 35.6 1.0 O D:HOH801 4.7 36.7 1.0 CA E:SER319 4.7 36.1 1.0 O1G E:TTP700 4.8 37.3 1.0 PA E:TTP700 4.9 37.3 1.0 CB E:GLN343 5.0 49.4 1.0 O1A E:TTP700 5.0 37.3 1.0

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