Magnesium in PDB 6yxs: Crystal Structure of the Apo Form of Choline Kinase From Plasmodium Falciparum

All present enzymatic activity of Crystal Structure of the Apo Form of Choline Kinase From Plasmodium Falciparum:
2.7.1.32;

The structure of Crystal Structure of the Apo Form of Choline Kinase From Plasmodium Falciparum, PDB code: 6yxs was solved by A.Torretta, E.Parisini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	57.53 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	66.410, 68.820, 104.800, 90.00, 90.00, 90.00
R / Rfree (%)	20.6 / 23.9

The binding sites of Magnesium atom in the Crystal Structure of the Apo Form of Choline Kinase From Plasmodium Falciparum (pdb code 6yxs). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Apo Form of Choline Kinase From Plasmodium Falciparum, PDB code: 6yxs:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Apo Form of Choline Kinase From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Apo Form of Choline Kinase From Plasmodium Falciparum within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:28.3 occ:1.00 OD2 A:ASP305 2.0 27.9 1.0 O A:HOH701 2.0 25.7 1.0 OD1 A:ASN293 2.0 18.6 1.0 O A:HOH670 2.1 22.3 1.0 O A:HOH655 2.1 27.2 1.0 O A:HOH686 2.1 28.6 1.0 CG A:ASN293 3.1 23.6 1.0 CG A:ASP305 3.1 29.5 1.0 ND2 A:ASN293 3.6 17.9 1.0 CB A:ASP305 3.6 19.6 1.0 O A:HOH711 4.0 33.9 1.0 OD1 A:ASN292 4.1 37.1 1.0 OD1 A:ASP305 4.2 25.7 1.0 O A:ASN292 4.3 18.7 1.0 O A:HOH785 4.3 34.9 1.0 ND2 A:ASN292 4.3 41.4 1.0 CB A:ASN293 4.4 19.9 1.0 O A:HOH802 4.4 52.1 1.0 CG A:ASN292 4.4 33.1 1.0 O A:HOH780 4.5 43.4 1.0 O A:HOH692 4.6 30.0 1.0 CA A:ASN293 4.7 23.1 1.0 O A:HOH640 4.7 33.0 1.0 C A:ASN292 4.8 23.2 1.0 CD1 A:ILE304 4.8 20.4 1.0 N A:ASN293 4.9 17.6 1.0 O A:HOH755 5.0 43.0 1.0

A.Torretta, L.C.Lopez-Cara, E.Parisini. Crystal Structure of the Apo and the Adp-Bound Form of Choline Kinase From Plasmodium Falciparum Crystals 2020.
ISSN: ESSN 2073-4352
DOI: 10.3390/CRYST10070613