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Magnesium in PDB 7bcz: Structure of the 4'-Phosphopantetheinyl Transferase Pcps From Pseudomonas Aeruginosa

Protein crystallography data

The structure of Structure of the 4'-Phosphopantetheinyl Transferase Pcps From Pseudomonas Aeruginosa, PDB code: 7bcz was solved by C.Carivenc, L.Mourey, J.D.Pedelacq, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.49 / 2.40
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 44.359, 78.872, 81.123, 85.62, 84.62, 73.86
R / Rfree (%) 21 / 26.2

Other elements in 7bcz:

The structure of Structure of the 4'-Phosphopantetheinyl Transferase Pcps From Pseudomonas Aeruginosa also contains other interesting chemical elements:

Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the 4'-Phosphopantetheinyl Transferase Pcps From Pseudomonas Aeruginosa (pdb code 7bcz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the 4'-Phosphopantetheinyl Transferase Pcps From Pseudomonas Aeruginosa, PDB code: 7bcz:

Magnesium binding site 1 out of 1 in 7bcz

Go back to Magnesium Binding Sites List in 7bcz
Magnesium binding site 1 out of 1 in the Structure of the 4'-Phosphopantetheinyl Transferase Pcps From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the 4'-Phosphopantetheinyl Transferase Pcps From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg302

b:39.7
occ:1.00
OE2 C:GLU131 2.2 63.7 1.0
OD1 C:ASP129 2.6 61.0 1.0
O4A C:COA301 2.6 39.7 1.0
O2A C:COA301 2.8 31.9 1.0
O C:VAL130 2.8 35.2 1.0
CG C:ASP129 3.2 55.1 1.0
OD2 C:ASP129 3.2 59.5 1.0
CD C:GLU131 3.3 61.9 1.0
OE2 C:GLU175 3.4 56.4 1.0
O C:HOH417 3.4 43.0 1.0
P2A C:COA301 3.6 42.0 1.0
O3A C:COA301 3.9 38.8 1.0
P1A C:COA301 3.9 29.6 1.0
CG C:GLU131 4.0 56.2 1.0
C C:VAL130 4.0 34.2 1.0
OE1 C:GLU131 4.3 62.3 1.0
OG1 C:THR107 4.3 30.6 1.0
O5A C:COA301 4.3 40.7 1.0
N C:VAL130 4.4 37.7 1.0
CB C:ASP129 4.6 46.6 1.0
CD C:GLU175 4.6 53.0 1.0
O1A C:COA301 4.8 43.3 1.0
CE1 C:PHE171 4.9 34.9 1.0
CA C:VAL130 4.9 35.3 1.0
N C:GLU131 4.9 37.5 1.0
CA C:ASP129 4.9 40.7 1.0
C C:ASP129 4.9 37.5 1.0
CA C:GLU131 4.9 43.7 1.0

Reference:

C.Carivenc, L.Maveyraud, C.Blanger, S.Ballereau, C.Roy-Camille, M.C.Nguyen, Y.Genisson, C.Guilhot, C.Chalut, J.D.Pedelacq, L.Mourey. Phosphopantetheinyl Transferase Binding and Inhibition By Amidino-Urea and Hydroxypyrimidinethione Compounds. Sci Rep V. 11 18042 2021.
ISSN: ESSN 2045-2322
PubMed: 34508141
DOI: 10.1038/S41598-021-97197-4
Page generated: Wed Oct 2 10:25:37 2024

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