Magnesium in PDB 7jig: Hras A59T Gppnhp Crystal 2

Protein crystallography data

The structure of Hras A59T Gppnhp Crystal 2, PDB code: 7jig was solved by C.W.Johnson, K.M.Haigis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.74 / 2.32
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 38.964, 38.964, 159.048, 90, 90, 120
R / Rfree (%) 17.7 / 26.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Hras A59T Gppnhp Crystal 2 (pdb code 7jig). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Hras A59T Gppnhp Crystal 2, PDB code: 7jig:

Magnesium binding site 1 out of 1 in 7jig

Go back to Magnesium Binding Sites List in 7jig
Magnesium binding site 1 out of 1 in the Hras A59T Gppnhp Crystal 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Hras A59T Gppnhp Crystal 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:26.5
occ:1.00
OG1 A:THR35 1.8 24.9 1.0
O2G A:GNP201 2.1 23.2 1.0
OG A:SER17 2.1 18.2 1.0
O A:HOH318 2.1 26.5 1.0
O A:HOH303 2.2 19.0 1.0
O2B A:GNP201 2.2 20.1 1.0
CB A:THR35 2.9 27.3 1.0
CB A:SER17 3.1 21.6 1.0
PG A:GNP201 3.3 27.5 1.0
N A:THR35 3.3 29.6 1.0
PB A:GNP201 3.4 26.3 1.0
N3B A:GNP201 3.4 24.5 1.0
CA A:THR35 3.7 31.4 1.0
OD2 A:ASP57 3.7 25.2 1.0
N A:SER17 3.9 22.1 1.0
CA A:SER17 4.0 20.6 1.0
CG2 A:THR35 4.1 24.6 1.0
OD1 A:ASP57 4.1 30.9 1.0
O2A A:GNP201 4.1 20.0 1.0
O A:THR58 4.2 30.1 1.0
O3G A:GNP201 4.3 24.1 1.0
CG A:ASP57 4.3 25.4 1.0
O A:HOH319 4.3 26.9 1.0
O A:ASP33 4.4 22.5 1.0
O3A A:GNP201 4.4 27.3 1.0
C A:PRO34 4.4 32.3 1.0
O1G A:GNP201 4.4 28.0 1.0
O1B A:GNP201 4.4 26.1 1.0
PA A:GNP201 4.5 26.3 1.0
O1A A:GNP201 4.7 20.1 1.0
CA A:PRO34 4.7 27.8 1.0
CE A:LYS16 4.8 19.9 1.0
CB A:LYS16 4.8 18.3 1.0
C A:THR35 4.9 33.4 1.0
C A:LYS16 5.0 22.4 1.0

Reference:

C.W.Johnson, H.S.Seo, E.M.Terrell, M.H.Yang, F.Kleinjan, T.Gebregiworgis, G.M.C.Gasmi-Seabrook, E.A.Geffken, J.Lakhani, K.Song, P.Bashyal, O.Popow, J.A.Paulo, A.Liu, C.Mattos, C.B.Marshall, M.Ikura, D.K.Morrison, S.Dhe-Paganon, K.M.Haigis. Regulation of Gtpase Function By Autophosphorylation. Mol.Cell V. 82 950 2022.
ISSN: ISSN 1097-2765
PubMed: 35202574
DOI: 10.1016/J.MOLCEL.2022.02.011
Page generated: Wed Oct 2 21:53:05 2024

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