Magnesium in PDB 7k2t: MG2+/Atp-Bound Structure of the Full-Length Wzmwzt O Antigen Abc Transporter in Lipid Nanodiscs

Magnesium Binding Sites:

The binding sites of Magnesium atom in the MG2+/Atp-Bound Structure of the Full-Length Wzmwzt O Antigen Abc Transporter in Lipid Nanodiscs (pdb code 7k2t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the MG2+/Atp-Bound Structure of the Full-Length Wzmwzt O Antigen Abc Transporter in Lipid Nanodiscs, PDB code: 7k2t:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7k2t

Go back to Magnesium Binding Sites List in 7k2t
Magnesium binding site 1 out of 2 in the MG2+/Atp-Bound Structure of the Full-Length Wzmwzt O Antigen Abc Transporter in Lipid Nanodiscs


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of MG2+/Atp-Bound Structure of the Full-Length Wzmwzt O Antigen Abc Transporter in Lipid Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:39.0
occ:1.00
O1G A:ATP501 2.0 36.7 1.0
O1B A:ATP501 2.1 36.7 1.0
OG A:SER61 2.2 19.3 1.0
CB A:SER61 3.2 19.3 1.0
PB A:ATP501 3.2 36.7 1.0
PG A:ATP501 3.2 36.7 1.0
O3B A:ATP501 3.6 36.7 1.0
O3G A:ATP501 3.9 36.7 1.0
OG C:SER144 3.9 26.5 0.4
O2B A:ATP501 3.9 36.7 1.0
N A:SER61 4.3 19.3 1.0
CA A:SER61 4.3 19.3 1.0
NE2 A:GLN167 4.4 36.6 1.0
O2A A:ATP501 4.4 36.7 1.0
O2G A:ATP501 4.4 36.7 1.0
N C:SER144 4.4 26.5 1.0
O3A A:ATP501 4.5 36.7 1.0
CB C:SER144 4.6 26.5 0.4
CB C:SER143 4.6 27.5 1.0
OD1 A:ASP166 4.7 28.1 1.0
PA A:ATP501 4.9 36.7 1.0

Magnesium binding site 2 out of 2 in 7k2t

Go back to Magnesium Binding Sites List in 7k2t
Magnesium binding site 2 out of 2 in the MG2+/Atp-Bound Structure of the Full-Length Wzmwzt O Antigen Abc Transporter in Lipid Nanodiscs


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of MG2+/Atp-Bound Structure of the Full-Length Wzmwzt O Antigen Abc Transporter in Lipid Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg502

b:28.9
occ:1.00
O1G C:ATP501 2.0 36.7 1.0
O1B C:ATP501 2.1 36.7 1.0
OG C:SER61 2.2 24.4 1.0
CB C:SER61 3.2 24.4 1.0
PG C:ATP501 3.4 36.7 1.0
PB C:ATP501 3.4 36.7 1.0
O3B C:ATP501 3.7 36.7 1.0
O2G C:ATP501 4.0 36.7 1.0
OG A:SER144 4.1 20.1 0.4
OD2 C:ASP166 4.2 36.1 1.0
O2B C:ATP501 4.2 36.7 1.0
OD1 C:ASP166 4.3 36.1 1.0
OE1 C:GLN167 4.3 41.3 1.0
N C:SER61 4.4 24.4 1.0
CA C:SER61 4.4 24.4 1.0
CB A:SER144 4.4 20.1 0.4
O2A C:ATP501 4.5 36.7 1.0
O3G C:ATP501 4.6 36.7 1.0
N A:SER144 4.6 20.1 1.0
O3A C:ATP501 4.6 36.7 1.0
CG C:ASP166 4.6 36.1 1.0
CD C:GLN167 4.7 41.3 1.0
NE2 C:GLN167 4.7 41.3 1.0
PA C:ATP501 4.9 36.7 1.0

Reference:

C.A.Caffalette, J.Zimmer. Cryo-Em Structure of the Full-Length Wzmwzt Abc Transporter Required For Lipid-Linked O Antigen Transport Proc.Natl.Acad.Sci.Usa 2021.
ISSN: ESSN 1091-6490
DOI: 10.1073/PNAS.2016144118
Page generated: Wed Oct 2 22:07:20 2024

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