Magnesium in PDB 7klu: Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp

All present enzymatic activity of Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp:
1.3.5.1;

The structure of Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp also contains other interesting chemical elements:

Potassium

(K)

4 atoms

The binding sites of Magnesium atom in the Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp (pdb code 7klu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp, PDB code: 7klu:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:36.8 occ:1.00 O3G A:ANP901 2.1 70.3 1.0 O1B A:ANP901 2.1 70.3 1.0 OD1 A:ASN119 2.4 47.7 1.0 O2A A:ANP901 3.2 70.3 1.0 PG A:ANP901 3.4 70.3 1.0 PB A:ANP901 3.5 70.3 1.0 CG A:ASN119 3.6 47.7 1.0 O1G A:ANP901 3.9 70.3 1.0 N3B A:ANP901 4.0 70.3 1.0 CA A:GLY199 4.0 44.7 1.0 O A:GLU115 4.2 40.3 1.0 CB A:SER118 4.2 37.5 1.0 ND2 A:ASN119 4.3 47.7 1.0 N A:ASN119 4.3 47.7 1.0 N A:GLY199 4.4 44.7 1.0 OE2 A:GLU115 4.4 40.3 1.0 PA A:ANP901 4.4 70.3 1.0 O3A A:ANP901 4.4 70.3 1.0 O2B A:ANP901 4.5 70.3 1.0 CA A:ASN119 4.6 47.7 1.0 OD2 A:ASP122 4.6 49.6 1.0 O2G A:ANP901 4.6 70.3 1.0 C A:SER118 4.6 37.5 1.0 CB A:ASN119 4.7 47.7 1.0

Magnesium binding site 2 out of 4 in the Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg902 b:47.4 occ:1.00 O3G B:ANP901 2.0 53.0 1.0 OD1 B:ASN119 2.0 52.7 1.0 O1B B:ANP901 2.1 53.0 1.0 O2A B:ANP901 2.2 53.0 1.0 CG B:ASN119 3.1 52.7 1.0 PG B:ANP901 3.4 53.0 1.0 PB B:ANP901 3.5 53.0 1.0 ND2 B:ASN119 3.7 52.7 1.0 PA B:ANP901 3.7 53.0 1.0 O1G B:ANP901 3.8 53.0 1.0 O B:GLU115 3.9 42.9 1.0 OE1 B:GLU115 3.9 42.9 1.0 N3B B:ANP901 4.1 53.0 1.0 O3A B:ANP901 4.1 53.0 1.0 CA B:GLY204 4.2 43.3 1.0 CB B:ASN119 4.3 52.7 1.0 N B:ASN119 4.4 52.7 1.0 O1A B:ANP901 4.5 53.0 1.0 CA B:ASN119 4.5 52.7 1.0 O2G B:ANP901 4.6 53.0 1.0 O2B B:ANP901 4.6 53.0 1.0 CA B:GLY199 4.7 56.5 1.0 C B:GLU115 4.8 42.9 1.0 O5' B:ANP901 4.8 53.0 1.0 N B:GLY204 4.8 43.3 1.0 C B:GLY204 4.8 43.3 1.0 CB B:SER118 4.8 47.0 1.0 CA B:GLU115 5.0 42.9 1.0 C B:SER118 5.0 47.0 1.0

Magnesium binding site 3 out of 4 in the Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg902 b:45.1 occ:1.00 OD1 D:ASN119 2.1 55.2 1.0 O3G D:ANP901 2.1 57.1 1.0 O1B D:ANP901 2.1 57.1 1.0 O2A D:ANP901 2.4 57.1 1.0 CG D:ASN119 3.2 55.2 1.0 PG D:ANP901 3.4 57.1 1.0 PB D:ANP901 3.5 57.1 1.0 O1G D:ANP901 3.8 57.1 1.0 PA D:ANP901 3.8 57.1 1.0 ND2 D:ASN119 3.9 55.2 1.0 OE2 D:GLU115 4.0 55.8 1.0 N3B D:ANP901 4.1 57.1 1.0 O3A D:ANP901 4.2 57.1 1.0 O D:GLU115 4.2 55.8 1.0 N D:ASN119 4.2 55.2 1.0 CB D:ASN119 4.3 55.2 1.0 CA D:ASN119 4.3 55.2 1.0 CA D:GLY199 4.4 59.0 1.0 OD2 D:ASP122 4.5 70.0 1.0 O2B D:ANP901 4.5 57.1 1.0 CB D:SER118 4.6 51.8 1.0 O2G D:ANP901 4.6 57.1 1.0 C D:SER118 4.7 51.8 1.0 O1A D:ANP901 4.7 57.1 1.0 CA D:GLY204 4.8 50.8 1.0 O5' D:ANP901 4.9 57.1 1.0 N D:GLY199 4.9 59.0 1.0

Magnesium binding site 4 out of 4 in the Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Tetrameric Human Mitochondrial HSP90 (TRAP1) in the Presence of Amp- Pnp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg902 b:33.6 occ:1.00 O1B C:ANP901 2.1 42.1 1.0 O3G C:ANP901 2.1 42.1 1.0 OD1 C:ASN119 2.1 37.0 1.0 O2A C:ANP901 2.9 42.1 1.0 PG C:ANP901 3.2 42.1 1.0 CG C:ASN119 3.3 37.0 1.0 O1G C:ANP901 3.4 42.1 1.0 PB C:ANP901 3.5 42.1 1.0 OE1 C:GLU115 3.6 43.3 1.0 N3B C:ANP901 3.9 42.1 1.0 ND2 C:ASN119 4.0 37.0 1.0 O C:GLU115 4.1 43.3 1.0 PA C:ANP901 4.3 42.1 1.0 N C:ASN119 4.3 37.0 1.0 O3A C:ANP901 4.4 42.1 1.0 CA C:ASN119 4.4 37.0 1.0 O2B C:ANP901 4.4 42.1 1.0 CB C:ASN119 4.4 37.0 1.0 CA C:GLY199 4.5 44.4 1.0 CB C:SER118 4.5 37.0 1.0 O2G C:ANP901 4.6 42.1 1.0 C C:SER118 4.7 37.0 1.0 CD C:GLU115 4.8 43.3 1.0 N C:GLY199 4.9 44.4 1.0 CA C:GLY204 5.0 40.6 1.0

Y.X.Liu, D.A.Agard, D.Elnatan, M.Sun, A.G.Larson. Cryo-Em Analysis of Human Mitochondrial HSP90 in Multiple Tetrameric States To Be Published.