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Magnesium in PDB 7ku5: The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna (pdb code 7ku5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna, PDB code: 7ku5:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 7ku5

Go back to Magnesium Binding Sites List in 7ku5
Magnesium binding site 1 out of 3 in the The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna within 5.0Å range:
probe atom residue distance (Å) B Occ
O:Mg201

b:61.5
occ:1.00
MG O:CLA201 0.0 61.5 1.0
NB O:CLA201 2.0 61.5 1.0
ND O:CLA201 2.0 61.5 1.0
NC O:CLA201 2.1 61.5 1.0
NA O:CLA201 2.1 61.5 1.0
C4D O:CLA201 2.9 61.5 1.0
C1B O:CLA201 3.0 61.5 1.0
C4A O:CLA201 3.1 61.5 1.0
C4B O:CLA201 3.1 61.5 1.0
C1C O:CLA201 3.1 61.5 1.0
C4C O:CLA201 3.1 61.5 1.0
C1A O:CLA201 3.1 61.5 1.0
C1D O:CLA201 3.2 61.5 1.0
NE2 O:HIS121 3.2 60.9 1.0
CE1 O:HIS121 3.3 60.9 1.0
CHB O:CLA201 3.4 61.5 1.0
CHC O:CLA201 3.4 61.5 1.0
CHA O:CLA201 3.5 61.5 1.0
CHD O:CLA201 3.5 61.5 1.0
CD2 O:HIS121 4.1 60.9 1.0
ND1 O:HIS121 4.2 60.9 1.0
C3D O:CLA201 4.3 61.5 1.0
C2B O:CLA201 4.3 61.5 1.0
C3B O:CLA201 4.3 61.5 1.0
C2C O:CLA201 4.3 61.5 1.0
C2D O:CLA201 4.4 61.5 1.0
C3C O:CLA201 4.4 61.5 1.0
C3A O:CLA201 4.4 61.5 1.0
C2A O:CLA201 4.5 61.5 1.0
CG O:HIS121 4.6 60.9 1.0
CBD O:CLA201 4.9 61.5 1.0

Magnesium binding site 2 out of 3 in 7ku5

Go back to Magnesium Binding Sites List in 7ku5
Magnesium binding site 2 out of 3 in the The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna within 5.0Å range:
probe atom residue distance (Å) B Occ
O:Mg202

b:49.8
occ:1.00
MG O:CLA202 0.0 49.8 1.0
NB O:CLA202 2.0 49.8 1.0
ND O:CLA202 2.0 49.8 1.0
NC O:CLA202 2.1 49.8 1.0
NA O:CLA202 2.1 49.8 1.0
C4D O:CLA202 2.9 49.8 1.0
C1B O:CLA202 3.0 49.8 1.0
C4A O:CLA202 3.1 49.8 1.0
C4B O:CLA202 3.1 49.8 1.0
C1C O:CLA202 3.1 49.8 1.0
C4C O:CLA202 3.1 49.8 1.0
C1A O:CLA202 3.2 49.8 1.0
C1D O:CLA202 3.2 49.8 1.0
CHB O:CLA202 3.4 49.8 1.0
CHC O:CLA202 3.4 49.8 1.0
CHA O:CLA202 3.5 49.8 1.0
CHD O:CLA202 3.5 49.8 1.0
O O:PHE130 4.2 50.2 1.0
C3D O:CLA202 4.3 49.8 1.0
C2B O:CLA202 4.3 49.8 1.0
C3B O:CLA202 4.3 49.8 1.0
C2C O:CLA202 4.3 49.8 1.0
C2D O:CLA202 4.4 49.8 1.0
C3C O:CLA202 4.4 49.8 1.0
C3A O:CLA202 4.4 49.8 1.0
C2A O:CLA202 4.5 49.8 1.0
C O:PHE130 4.8 50.2 1.0
CA O:GLY134 4.9 53.1 1.0
CBD O:CLA202 4.9 49.8 1.0
CB O:PHE130 5.0 50.2 1.0

Magnesium binding site 3 out of 3 in 7ku5

Go back to Magnesium Binding Sites List in 7ku5
Magnesium binding site 3 out of 3 in the The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Structure of the Moss Psi-Lhci Reveals the Evolution of the Lhci Antenna within 5.0Å range:
probe atom residue distance (Å) B Occ
O:Mg203

b:74.1
occ:1.00
MG O:CLA203 0.0 74.1 1.0
NB O:CLA203 2.0 74.1 1.0
ND O:CLA203 2.0 74.1 1.0
NC O:CLA203 2.1 74.1 1.0
NA O:CLA203 2.1 74.1 1.0
C4D O:CLA203 2.9 74.1 1.0
C1B O:CLA203 3.0 74.1 1.0
C4A O:CLA203 3.1 74.1 1.0
C4B O:CLA203 3.1 74.1 1.0
C1C O:CLA203 3.1 74.1 1.0
C4C O:CLA203 3.1 74.1 1.0
C1A O:CLA203 3.1 74.1 1.0
C1D O:CLA203 3.2 74.1 1.0
CHB O:CLA203 3.4 74.1 1.0
CHC O:CLA203 3.4 74.1 1.0
CHA O:CLA203 3.5 74.1 1.0
CHD O:CLA203 3.5 74.1 1.0
CG O:PRO107 3.6 65.9 1.0
CB O:PRO107 4.2 65.9 1.0
C3D O:CLA203 4.3 74.1 1.0
C2B O:CLA203 4.3 74.1 1.0
C3B O:CLA203 4.3 74.1 1.0
C2C O:CLA203 4.3 74.1 1.0
C2D O:CLA203 4.4 74.1 1.0
C3C O:CLA203 4.4 74.1 1.0
C3A O:CLA203 4.4 74.1 1.0
C2A O:CLA203 4.5 74.1 1.0
CD O:PRO107 4.6 65.9 1.0
CBD O:CLA203 4.9 74.1 1.0

Reference:

C.Gorski, R.Riddle, H.Toporik, Z.Da, Z.Dobson, D.Williams, Y.Mazor. The Structure of the Physcomitrium Patens Photosystem I Reveals A Unique LHCA2 Paralogue Replacing LHCA4. Nat.Plants V. 8 307 2022.
ISSN: ESSN 2055-0278
PubMed: 35190662
DOI: 10.1038/S41477-022-01099-W
Page generated: Wed Apr 5 13:10:33 2023

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