Magnesium in PDB 7l1q: PS3 F1-Atpase Binding/Ts Dwell

All present enzymatic activity of PS3 F1-Atpase Binding/Ts Dwell:
7.1.2.2;

The binding sites of Magnesium atom in the PS3 F1-Atpase Binding/Ts Dwell (pdb code 7l1q). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the PS3 F1-Atpase Binding/Ts Dwell, PDB code: 7l1q:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in the PS3 F1-Atpase Binding/Ts Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of PS3 F1-Atpase Binding/Ts Dwell within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:68.5 occ:1.00 O2B A:ATP600 1.8 83.0 1.0 O2G A:ATP600 2.7 83.0 1.0 OG1 A:THR176 2.9 65.8 1.0 PB A:ATP600 3.0 83.0 1.0 O3A A:ATP600 3.2 83.0 1.0 CB A:THR176 3.4 65.8 1.0 PG A:ATP600 3.5 83.0 1.0 O1G A:ATP600 3.5 83.0 1.0 O3B A:ATP600 3.7 83.0 1.0 CG A:LYS175 3.9 68.9 1.0 N A:THR176 4.1 65.8 1.0 O1A A:ATP600 4.1 83.0 1.0 PA A:ATP600 4.2 83.0 1.0 O1B A:ATP600 4.3 83.0 1.0 CD A:LYS175 4.3 68.9 1.0 CA A:THR176 4.4 65.8 1.0 CG2 A:THR176 4.6 65.8 1.0 O2A A:ATP600 4.8 83.0 1.0 O3G A:ATP600 4.9 83.0 1.0

Magnesium binding site 2 out of 6 in the PS3 F1-Atpase Binding/Ts Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of PS3 F1-Atpase Binding/Ts Dwell within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:64.8 occ:1.00 O1G B:ATP600 2.1 79.1 1.0 OG1 B:THR176 2.3 59.6 1.0 O1B B:ATP600 2.5 79.1 1.0 O2G B:ATP600 2.6 79.1 1.0 PG B:ATP600 2.8 79.1 1.0 CB B:THR176 3.0 59.6 1.0 PB B:ATP600 3.7 79.1 1.0 O3B B:ATP600 3.7 79.1 1.0 N B:THR176 3.8 59.6 1.0 CA B:THR176 4.0 59.6 1.0 CG2 B:THR176 4.1 59.6 1.0 O3G B:ATP600 4.1 79.1 1.0 O2A B:ATP600 4.3 79.1 1.0 O3A B:ATP600 4.4 79.1 1.0 OD1 B:ASP261 4.4 46.0 1.0 PA B:ATP600 4.6 79.1 1.0 O1A B:ATP600 4.7 79.1 1.0 OD2 B:ASP261 4.8 46.0 1.0 C B:LYS175 5.0 62.0 1.0 O2B B:ATP600 5.0 79.1 1.0

Magnesium binding site 3 out of 6 in the PS3 F1-Atpase Binding/Ts Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of PS3 F1-Atpase Binding/Ts Dwell within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:41.8 occ:1.00 O1G C:ATP602 2.3 20.0 1.0 O2G C:ATP602 3.0 20.0 1.0 PG C:ATP602 3.0 20.0 1.0 OG1 C:THR176 3.2 47.2 1.0 O3G C:ATP602 3.6 20.0 1.0 OE1 C:GLN200 3.6 56.0 1.0 OD1 C:ASP261 4.0 46.6 1.0 OD2 C:ASP261 4.2 46.6 1.0 CG C:ASP261 4.3 46.6 1.0 NZ C:LYS175 4.3 49.0 1.0 CB C:THR176 4.4 47.2 1.0 CD C:GLN200 4.4 56.0 1.0 O3B C:ATP602 4.4 20.0 1.0 O2B C:ATP602 4.6 20.0 1.0 O C:ASP261 4.6 46.6 1.0 OD2 C:ASP262 4.6 49.5 1.0 NE2 C:GLN200 4.8 56.0 1.0

Magnesium binding site 4 out of 6 in the PS3 F1-Atpase Binding/Ts Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of PS3 F1-Atpase Binding/Ts Dwell within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg502 b:47.2 occ:1.00 O4 D:PO4501 2.2 51.1 1.0 O3 D:PO4501 2.7 51.1 1.0 O3B D:ADP500 2.8 58.8 1.0 P D:PO4501 2.9 51.1 1.0 PB D:ADP500 3.0 58.8 1.0 O1B D:ADP500 3.1 58.8 1.0 OG1 D:THR165 3.2 51.9 1.0 O2B D:ADP500 3.2 58.8 1.0 O2 D:PO4501 3.5 51.1 1.0 NH2 D:ARG256 3.9 51.9 1.0 NH2 D:ARG191 4.1 48.6 1.0 O1 D:PO4501 4.2 51.1 1.0 OD2 D:ASP252 4.2 53.3 1.0 OD2 D:ASP190 4.4 53.3 1.0 CB D:THR165 4.5 51.9 1.0 OD1 D:ASP252 4.6 53.3 1.0 O3A D:ADP500 4.6 58.8 1.0 CG D:ASP252 4.7 53.3 1.0 CZ D:ARG256 4.9 51.9 1.0

Magnesium binding site 5 out of 6 in the PS3 F1-Atpase Binding/Ts Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of PS3 F1-Atpase Binding/Ts Dwell within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg502 b:79.4 occ:1.00 OE1 E:GLU194 2.2 74.1 1.0 O2G E:ATP501 2.2 85.8 1.0 OG1 E:THR165 2.4 76.3 1.0 O2B E:ATP501 2.8 85.8 1.0 CD E:GLU194 3.2 74.1 1.0 PG E:ATP501 3.3 85.8 1.0 O3B E:ATP501 3.3 85.8 1.0 CB E:THR165 3.3 76.3 1.0 PB E:ATP501 3.6 85.8 1.0 OE2 E:GLU194 3.7 74.1 1.0 CG2 E:THR165 4.0 76.3 1.0 O1G E:ATP501 4.1 85.8 1.0 O3A E:ATP501 4.2 85.8 1.0 O1A E:ATP501 4.4 85.8 1.0 O3G E:ATP501 4.4 85.8 1.0 CG E:GLU194 4.5 74.1 1.0 CA E:THR165 4.6 76.3 1.0 CB E:GLU194 4.7 74.1 1.0 N E:THR165 4.7 76.3 1.0 PA E:ATP501 4.8 85.8 1.0 NH1 E:ARG191 4.9 62.2 1.0 OD2 E:ASP252 4.9 57.0 1.0 O1B E:ATP501 5.0 85.8 1.0

Magnesium binding site 6 out of 6 in the PS3 F1-Atpase Binding/Ts Dwell


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of PS3 F1-Atpase Binding/Ts Dwell within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg501 b:53.0 occ:1.00 OG1 F:THR165 2.1 51.5 1.0 O2G F:ATP500 2.4 56.9 1.0 CB F:THR165 3.2 51.5 1.0 O2B F:ATP500 3.3 56.9 1.0 PG F:ATP500 3.9 56.9 1.0 CG2 F:THR165 3.9 51.5 1.0 OD2 F:ASP252 4.0 52.7 1.0 O3B F:ATP500 4.3 56.9 1.0 CA F:THR165 4.4 51.5 1.0 PB F:ATP500 4.5 56.9 1.0 N F:THR165 4.6 51.5 1.0 O3G F:ATP500 4.6 56.9 1.0 O2A F:ATP500 4.6 56.9 1.0 O1G F:ATP500 4.8 56.9 1.0 CG F:ASP252 5.0 52.7 1.0

M.Sobti, H.Ueno, H.Noji, A.G.Stewart. PS3 F1-Atpase Binding/Ts Dwell To Be Published.