Magnesium in PDB 7lc6: Cryo-Em Structure of Kdpfabc in E2-P State with BEF3

All present enzymatic activity of Cryo-Em Structure of Kdpfabc in E2-P State with BEF3:
7.2.2.6;

The structure of Cryo-Em Structure of Kdpfabc in E2-P State with BEF3 also contains other interesting chemical elements:

Potassium

(K)

1 atom

The binding sites of Magnesium atom in the Cryo-Em Structure of Kdpfabc in E2-P State with BEF3 (pdb code 7lc6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Kdpfabc in E2-P State with BEF3, PDB code: 7lc6:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Kdpfabc in E2-P State with BEF3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Kdpfabc in E2-P State with BEF3 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg701 b:180.0 occ:1.00 OD2 B:ASP307 2.2 178.3 1.0 CG B:ASP307 2.3 178.3 1.0 O B:THR309 2.4 183.9 1.0 OD1 B:ASP518 2.5 178.0 1.0 OD1 B:ASP307 2.5 178.3 1.0 HB3 B:ASP307 2.8 178.3 1.0 CB B:ASP307 3.1 178.3 1.0 H B:ASP518 3.4 178.0 1.0 HB2 B:ASP307 3.5 178.3 1.0 C B:THR309 3.6 183.9 1.0 H B:THR309 3.6 183.9 1.0 CG B:ASP518 3.7 178.0 1.0 HB B:THR309 3.7 183.9 1.0 HA2 B:GLY517 4.0 176.9 1.0 N B:THR309 4.1 183.9 1.0 H B:GLY519 4.1 181.2 1.0 OD2 B:ASP518 4.2 178.0 1.0 HA3 B:GLY160 4.2 194.4 1.0 CA B:THR309 4.2 183.9 1.0 N B:ASP518 4.2 178.0 1.0 HA2 B:GLY160 4.3 194.4 1.0 OD1 B:ASP522 4.3 180.5 1.0 CA B:ASP307 4.3 178.3 1.0 CB B:THR309 4.4 183.9 1.0 HA3 B:GLY310 4.5 181.4 1.0 HA B:ASP307 4.5 178.3 1.0 C B:ASP307 4.6 178.3 1.0 HA3 B:GLY517 4.6 176.9 1.0 N B:GLY310 4.7 181.4 1.0 CA B:GLY517 4.7 176.9 1.0 CG B:ASP522 4.7 180.5 1.0 CA B:GLY160 4.8 194.4 1.0 OD2 B:ASP522 4.8 180.5 1.0 N B:LYS308 4.9 184.0 1.0 H B:LYS308 4.9 184.0 1.0 HG22 B:THR309 4.9 183.9 1.0 OG1 B:THR311 4.9 178.8 1.0 CB B:ASP518 4.9 178.0 1.0 H B:THR311 4.9 178.8 1.0 N B:GLY519 4.9 181.2 1.0 HB B:THR311 5.0 178.8 1.0 CA B:GLY310 5.0 181.4 1.0

M.E.Sweet, C.Larsen, B.P.Pedersen, D.L.Stokes. Cryo-Em Structure of Kdpfabc in E2-P State with BEF3 To Be Published.