Magnesium in PDB 7lvq: KIF14[391-743] - Amp-Pnp Closed State Class in Complex with A Microtubule

Magnesium Binding Sites:

The binding sites of Magnesium atom in the KIF14[391-743] - Amp-Pnp Closed State Class in Complex with A Microtubule (pdb code 7lvq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the KIF14[391-743] - Amp-Pnp Closed State Class in Complex with A Microtubule, PDB code: 7lvq:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7lvq

Go back to Magnesium Binding Sites List in 7lvq
Magnesium binding site 1 out of 2 in the KIF14[391-743] - Amp-Pnp Closed State Class in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of KIF14[391-743] - Amp-Pnp Closed State Class in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:49.8
occ:1.00
O1G A:GTP501 1.9 50.7 1.0
OE2 A:GLU71 2.1 55.6 1.0
O1B A:GTP501 2.6 50.7 1.0
OD2 A:ASP98 2.7 55.3 1.0
CD A:GLU71 2.9 55.6 1.0
PG A:GTP501 3.4 50.7 1.0
OE1 A:GLN11 3.5 51.4 1.0
CG A:GLU71 3.7 55.6 1.0
CG A:ASP98 3.7 55.3 1.0
OE1 A:GLU71 3.7 55.6 1.0
PB A:GTP501 3.8 50.7 1.0
O3B A:GTP501 3.9 50.7 1.0
OD1 A:ASP98 4.0 55.3 1.0
CB A:GLN11 4.2 51.4 1.0
O3G A:GTP501 4.2 50.7 1.0
O2G A:GTP501 4.3 50.7 1.0
CD A:GLN11 4.3 51.4 1.0
NZ B:LYS252 4.6 50.4 1.0
CG A:GLN11 4.6 51.4 1.0
O3A A:GTP501 4.6 50.7 1.0
O1A A:GTP501 4.7 50.7 1.0
CB A:GLU71 4.9 55.6 1.0
N A:GLN11 4.9 51.4 1.0
O A:ASP69 4.9 54.5 1.0
O2B A:GTP501 4.9 50.7 1.0
CB A:ASP98 5.0 55.3 1.0

Magnesium binding site 2 out of 2 in 7lvq

Go back to Magnesium Binding Sites List in 7lvq
Magnesium binding site 2 out of 2 in the KIF14[391-743] - Amp-Pnp Closed State Class in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of KIF14[391-743] - Amp-Pnp Closed State Class in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg801

b:91.7
occ:1.00
OG K:SER603 2.2 87.5 1.0
OG K:SER489 2.2 94.9 1.0
O1G K:ANP802 2.2 96.3 1.0
O2B K:ANP802 2.2 96.3 1.0
CB K:SER603 2.7 87.5 1.0
O2G K:ANP802 2.8 96.3 1.0
PG K:ANP802 2.9 96.3 1.0
PB K:ANP802 3.2 96.3 1.0
N3B K:ANP802 3.5 96.3 1.0
CB K:SER489 3.5 94.9 1.0
O1B K:ANP802 3.6 96.3 1.0
CA K:SER603 3.9 87.5 1.0
N K:SER603 4.0 87.5 1.0
OD2 K:ASP638 4.2 89.2 1.0
O3G K:ANP802 4.3 96.3 1.0
N K:SER489 4.3 94.9 1.0
OD1 K:ASP638 4.4 89.2 1.0
CA K:SER489 4.4 94.9 1.0
O K:LEU639 4.5 84.5 1.0
O3A K:ANP802 4.6 96.3 1.0
CE K:LYS488 4.6 91.9 1.0
O2A K:ANP802 4.6 96.3 1.0
NH2 K:ARG591 4.7 89.1 1.0
CG K:ASP638 4.8 89.2 1.0
PA K:ANP802 4.9 96.3 1.0
C K:SER602 4.9 89.2 1.0

Reference:

M.P.M.H.Benoit, A.B.Asenjo, M.Paydar, S.Dhakal, B.Kwok, H.Sosa. Structural Basis of Mechano-Chemical Coupling By the Mitotic Kinesin KIF14 To Be Published.
Page generated: Sun Jul 11 17:45:54 2021

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