Magnesium in PDB 7m1t: Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp

The structure of Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp, PDB code: 7m1t was solved by Y.S.Chen, G.Kozlov, K.Gehring, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.31 / 3.26
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	61.05, 118.676, 177.305, 90, 90, 90
R / Rfree (%)	22.6 / 26.7

The binding sites of Magnesium atom in the Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp (pdb code 7m1t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp, PDB code: 7m1t:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:18.3 occ:1.00 O A:GLY110 1.9 21.9 1.0 OE2 A:GLU111 2.2 18.2 1.0 O A:SER21 2.3 22.3 1.0 HG A:SER25 2.3 17.3 1.0 OG A:SER21 2.3 22.8 1.0 OG A:SER71 2.5 38.8 1.0 HG A:SER71 2.5 47.2 1.0 HD21 A:ASN75 2.7 28.8 1.0 OG A:SER25 2.7 17.1 1.0 C A:GLY110 2.8 24.0 1.0 HG A:SER21 2.8 27.9 1.0 C A:SER21 2.9 23.6 1.0 HA3 A:GLY110 3.0 26.0 1.0 CD A:GLU111 3.1 17.6 1.0 CA A:GLY110 3.3 21.1 1.0 HA A:SER21 3.4 27.6 1.0 HA2 A:GLY110 3.4 26.0 1.0 CB A:SER21 3.4 20.0 1.0 ND2 A:ASN75 3.4 23.4 1.0 CA A:SER21 3.4 22.5 1.0 OD1 A:ASN75 3.4 22.8 1.0 CB A:SER71 3.7 23.2 1.0 HA2 A:GLY22 3.7 19.7 1.0 OE1 A:GLU111 3.7 19.1 1.0 HB2 A:SER71 3.7 28.5 1.0 HB2 A:SER25 3.8 18.1 1.0 CG A:ASN75 3.8 19.2 1.0 N A:GLY22 3.8 21.0 1.0 HA A:GLU111 3.8 17.9 1.0 CB A:SER25 3.9 16.9 1.0 HG2 A:GLU111 3.9 27.9 1.0 HB3 A:SER21 3.9 20.8 1.0 N A:GLU111 3.9 18.3 1.0 HA A:SER71 4.0 18.4 1.0 HB2 A:SER21 4.0 20.8 1.0 HD22 A:ASN75 4.1 28.8 1.0 H A:SER25 4.1 17.1 1.0 CG A:GLU111 4.1 22.7 1.0 HG13 A:VAL106 4.2 28.6 1.0 CA A:GLY22 4.3 19.1 1.0 O A:SER71 4.3 18.7 1.0 CA A:SER71 4.3 18.0 1.0 CA A:GLU111 4.3 17.6 1.0 HB3 A:SER71 4.4 28.5 1.0 HB3 A:SER25 4.4 18.1 1.0 HG2 A:PRO114 4.5 29.1 1.0 H A:GLY22 4.5 25.8 1.0 H A:GLU111 4.6 19.5 1.0 C A:SER71 4.7 18.2 1.0 N A:GLY110 4.7 24.4 1.0 N A:SER25 4.8 17.0 1.0 CB A:GLU111 4.8 18.2 1.0 HG3 A:GLU111 4.9 27.9 1.0 N A:SER21 4.9 20.1 1.0 CA A:SER25 4.9 16.5 1.0 HA3 A:GLY22 5.0 19.7 1.0 H A:GLY110 5.0 29.9 1.0

Magnesium binding site 2 out of 3 in the Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:16.3 occ:1.00 O1A B:ATP409 2.2 25.5 1.0 O3B B:ATP409 2.2 12.5 1.0 O1B B:ATP409 2.5 40.6 1.0 PB B:ATP409 2.8 13.0 1.0 HE1 A:HIS297 3.1 64.9 1.0 PG B:ATP409 3.1 21.5 1.0 HE2 A:HIS297 3.1 75.2 1.0 PA B:ATP409 3.2 21.3 1.0 O3G B:ATP409 3.2 56.1 1.0 O3A B:ATP409 3.4 12.4 1.0 O1G B:ATP409 3.4 27.9 1.0 O2A B:ATP409 3.5 21.8 1.0 CE1 A:HIS297 3.6 53.5 1.0 NE2 A:HIS297 3.6 62.1 1.0 HG2 B:GLU315 3.7 28.2 1.0 CD B:GLU315 4.1 53.0 1.0 OE1 B:GLU315 4.2 31.9 1.0 O2B B:ATP409 4.2 22.2 1.0 CG B:GLU315 4.4 23.0 1.0 HB2 B:GLU315 4.4 33.0 1.0 H5'1 B:ATP409 4.4 11.6 1.0 O2G B:ATP409 4.5 24.3 1.0 OE2 B:GLU315 4.5 61.4 1.0 O5' B:ATP409 4.6 18.2 1.0 CB B:GLU315 4.8 27.0 1.0 ND1 A:HIS297 4.9 34.3 1.0 CD2 A:HIS297 5.0 48.2 1.0 C5' B:ATP409 5.0 11.6 1.0

Magnesium binding site 3 out of 3 in the Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of An Archaeal Cnnm, Mtcorb, with C-Terminal Deletion in Complex with MG2+-Atp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:25.7 occ:1.00 O1A A:ATP408 2.0 18.1 1.0 O1B A:ATP408 2.0 26.6 1.0 O1G A:ATP408 2.1 35.9 1.0 HE2 B:HIS297 2.6 37.3 1.0 PB A:ATP408 3.2 13.6 1.0 NE2 B:HIS297 3.3 30.6 1.0 PA A:ATP408 3.3 19.4 1.0 PG A:ATP408 3.3 22.6 1.0 HE1 B:HIS297 3.4 42.2 1.0 O3B A:ATP408 3.6 13.5 1.0 O3A A:ATP408 3.6 13.4 1.0 H5'1 A:ATP408 3.7 12.8 1.0 CE1 B:HIS297 3.7 34.6 1.0 HG3 A:GLU315 3.8 10.5 1.0 O2G A:ATP408 4.2 26.1 1.0 O2A A:ATP408 4.2 16.8 1.0 C5' A:ATP408 4.3 12.7 1.0 O3G A:ATP408 4.4 36.7 1.0 O5' A:ATP408 4.4 12.8 1.0 H5'2 A:ATP408 4.4 12.8 1.0 HB2 A:GLU315 4.4 25.8 1.0 O2B A:ATP408 4.4 39.0 1.0 CD2 B:HIS297 4.5 29.5 1.0 HH22 B:ARG235 4.5 40.4 1.0 CG A:GLU315 4.7 11.3 1.0 HZ1 B:LYS253 4.7 42.4 1.0 HH21 B:ARG235 4.8 40.4 1.0 HD2 B:HIS297 4.9 36.1 1.0 HB3 A:GLU315 4.9 25.8 1.0 CB A:GLU315 5.0 20.9 1.0 ND1 B:HIS297 5.0 27.5 1.0

Y.S.Chen, G.Kozlov, B.E.Moeller, A.Rohaim, R.Fakih, B.Roux, J.E.Burke, K.Gehring. Crystal Structure of An Archaeal Corb Magnesium Transporter To Be Published.