Atomistry » Magnesium » PDB 7m5v-7mdi » 7m99
Atomistry »
  Magnesium »
    PDB 7m5v-7mdi »
      7m99 »

Magnesium in PDB 7m99: Atpgs Bound Tnsc Filament From Shcast System

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atpgs Bound Tnsc Filament From Shcast System (pdb code 7m99). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Atpgs Bound Tnsc Filament From Shcast System, PDB code: 7m99:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 7m99

Go back to Magnesium Binding Sites List in 7m99
Magnesium binding site 1 out of 7 in the Atpgs Bound Tnsc Filament From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atpgs Bound Tnsc Filament From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:30.0
occ:1.00
 O1B B:AGS300 2.2 41.0 1.0
OG1 B:THR67 2.5 41.0 1.0
S1G B:AGS300 2.5 41.0 1.0
PB B:AGS300 3.5 41.0 1.0
CB B:THR67 3.5 41.0 1.0
PG B:AGS300 3.7 41.0 1.0
O3A B:AGS300 3.7 41.0 1.0
O2G B:AGS300 3.8 41.0 1.0
O3B B:AGS300 4.1 41.0 1.0
OE2 A:GLU162 4.1 41.0 1.0
NH2 A:ARG189 4.2 41.0 1.0
CG2 B:THR67 4.3 41.0 1.0
OE2 B:GLU145 4.5 41.0 1.0
OE1 A:GLU162 4.6 41.0 1.0
CA B:THR67 4.7 41.0 1.0
OD1 B:ASP144 4.8 41.0 1.0
O2B B:AGS300 4.8 41.0 1.0
CD A:GLU162 4.8 41.0 1.0
N B:THR67 4.8 41.0 1.0
CD B:GLU145 4.8 41.0 1.0
NE2 A:GLN185 4.9 41.0 1.0
OD2 B:ASP144 4.9 41.0 1.0
CG B:GLU145 5.0 41.0 1.0

Magnesium binding site 2 out of 7 in 7m99

Go back to Magnesium Binding Sites List in 7m99
Magnesium binding site 2 out of 7 in the Atpgs Bound Tnsc Filament From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atpgs Bound Tnsc Filament From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg301

b:30.0
occ:1.00
 O3G C:AGS300 2.2 41.0 1.0
OG1 C:THR67 2.4 41.0 1.0
O3B C:AGS300 2.6 41.0 1.0
O1B C:AGS300 2.7 41.0 1.0
PG C:AGS300 2.9 41.0 1.0
PB C:AGS300 3.0 41.0 1.0
CB C:THR67 3.6 41.0 1.0
O2B C:AGS300 3.7 41.0 1.0
O2G C:AGS300 3.8 41.0 1.0
OE2 C:GLU145 4.0 41.0 1.0
OD2 C:ASP144 4.4 41.0 1.0
N C:THR67 4.4 41.0 1.0
NH2 B:ARG189 4.4 41.0 1.0
O3A C:AGS300 4.5 41.0 1.0
CA C:THR67 4.6 41.0 1.0
OD1 C:ASP144 4.6 41.0 1.0
S1G C:AGS300 4.6 41.0 1.0
NZ C:LYS66 4.6 41.0 1.0
CG2 C:THR67 4.6 41.0 1.0
NE2 B:GLN185 4.6 41.0 1.0
CG C:GLU145 4.8 41.0 1.0
CD C:GLU145 4.8 41.0 1.0
CG C:ASP144 5.0 41.0 1.0

Magnesium binding site 3 out of 7 in 7m99

Go back to Magnesium Binding Sites List in 7m99
Magnesium binding site 3 out of 7 in the Atpgs Bound Tnsc Filament From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Atpgs Bound Tnsc Filament From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg301

b:30.0
occ:1.00
 O3B D:AGS300 2.2 41.0 1.0
OG1 D:THR67 2.3 41.0 1.0
O3G D:AGS300 2.7 41.0 1.0
PG D:AGS300 2.9 41.0 1.0
OE2 D:GLU145 3.4 41.0 1.0
CB D:THR67 3.4 41.0 1.0
PB D:AGS300 3.4 41.0 1.0
O3A D:AGS300 3.5 41.0 1.0
S1G D:AGS300 3.8 41.0 1.0
O1B D:AGS300 4.0 41.0 1.0
N D:THR67 4.3 41.0 1.0
CD D:GLU145 4.3 41.0 1.0
O2G D:AGS300 4.4 41.0 1.0
CA D:THR67 4.4 41.0 1.0
CG2 D:THR67 4.4 41.0 1.0
CG D:GLU145 4.6 41.0 1.0
O2B D:AGS300 4.6 41.0 1.0
NZ D:LYS66 4.7 41.0 1.0
NE2 C:GLN185 4.8 41.0 1.0
PA D:AGS300 4.8 41.0 1.0
NH2 C:ARG189 4.9 41.0 1.0
O2A D:AGS300 4.9 41.0 1.0
OE2 C:GLU162 5.0 41.0 1.0
OD2 D:ASP144 5.0 41.0 1.0

Magnesium binding site 4 out of 7 in 7m99

Go back to Magnesium Binding Sites List in 7m99
Magnesium binding site 4 out of 7 in the Atpgs Bound Tnsc Filament From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Atpgs Bound Tnsc Filament From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg301

b:30.0
occ:1.00
 OG1 E:THR67 2.2 41.0 1.0
O3B E:AGS300 2.2 41.0 1.0
PG E:AGS300 3.2 41.0 1.0
CB E:THR67 3.3 41.0 1.0
O3A E:AGS300 3.4 41.0 1.0
PB E:AGS300 3.4 41.0 1.0
O3G E:AGS300 3.4 41.0 1.0
S1G E:AGS300 3.9 41.0 1.0
O1B E:AGS300 4.0 41.0 1.0
N E:THR67 4.2 41.0 1.0
CA E:THR67 4.3 41.0 1.0
CG2 E:THR67 4.3 41.0 1.0
OD2 E:ASP144 4.4 41.0 1.0
O2B E:AGS300 4.6 41.0 1.0
O2G E:AGS300 4.7 41.0 1.0
OD1 E:ASP144 4.7 41.0 1.0
NZ E:LYS66 4.8 41.0 1.0
NH2 D:ARG189 4.9 41.0 1.0
OE2 D:GLU162 4.9 41.0 1.0
CG E:ASP144 4.9 41.0 1.0
PA E:AGS300 4.9 41.0 1.0
NE2 D:GLN185 4.9 41.0 1.0
CD E:GLU145 5.0 41.0 1.0

Magnesium binding site 5 out of 7 in 7m99

Go back to Magnesium Binding Sites List in 7m99
Magnesium binding site 5 out of 7 in the Atpgs Bound Tnsc Filament From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Atpgs Bound Tnsc Filament From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg301

b:30.0
occ:1.00
 O2B F:AGS300 2.2 41.0 1.0
OG1 F:THR67 2.2 41.0 1.0
S1G F:AGS300 2.5 41.0 1.0
PG F:AGS300 3.4 41.0 1.0
PB F:AGS300 3.4 41.0 1.0
O3B F:AGS300 3.5 41.0 1.0
CB F:THR67 3.5 41.0 1.0
O2A F:AGS300 3.6 41.0 1.0
O3G F:AGS300 3.6 41.0 1.0
OD2 F:ASP144 4.2 41.0 1.0
CG2 F:THR67 4.3 41.0 1.0
OE2 E:GLU162 4.4 41.0 1.0
O1B F:AGS300 4.5 41.0 1.0
O3A F:AGS300 4.5 41.0 1.0
OE2 F:GLU145 4.6 41.0 1.0
CA F:THR67 4.6 41.0 1.0
PA F:AGS300 4.6 41.0 1.0
NH2 E:ARG189 4.7 41.0 1.0
N F:THR67 4.7 41.0 1.0
O2G F:AGS300 4.9 41.0 1.0
OD1 F:ASP144 5.0 41.0 1.0

Magnesium binding site 6 out of 7 in 7m99

Go back to Magnesium Binding Sites List in 7m99
Magnesium binding site 6 out of 7 in the Atpgs Bound Tnsc Filament From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Atpgs Bound Tnsc Filament From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg301

b:30.0
occ:1.00
 OG1 G:THR67 1.9 41.0 1.0
S1G G:AGS300 2.1 41.0 1.0
CB G:THR67 2.7 41.0 1.0
O2B G:AGS300 2.8 41.0 1.0
CG2 G:THR67 3.3 41.0 1.0
OE2 F:GLU162 3.6 41.0 1.0
OD2 G:ASP144 3.8 41.0 1.0
CA G:THR67 4.0 41.0 1.0
PG G:AGS300 4.1 41.0 1.0
PB G:AGS300 4.2 41.0 1.0
CD F:GLU162 4.4 41.0 1.0
N G:THR67 4.4 41.0 1.0
OE1 F:GLU162 4.5 41.0 1.0
OE2 G:GLU145 4.6 41.0 1.0
NH2 F:ARG189 4.7 41.0 1.0
O3B G:AGS300 4.7 41.0 1.0
O2A G:AGS300 4.8 41.0 1.0
CG G:ASP144 4.8 41.0 1.0
O3G G:AGS300 4.9 41.0 1.0
O2G G:AGS300 4.9 41.0 1.0
O3A G:AGS300 5.0 41.0 1.0

Magnesium binding site 7 out of 7 in 7m99

Go back to Magnesium Binding Sites List in 7m99
Magnesium binding site 7 out of 7 in the Atpgs Bound Tnsc Filament From Shcast System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Atpgs Bound Tnsc Filament From Shcast System within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Mg301

b:30.0
occ:1.00
 OG1 H:THR67 1.8 41.0 1.0
S1G H:AGS300 2.5 41.0 1.0
O3B H:AGS300 2.7 41.0 1.0
CB H:THR67 2.9 41.0 1.0
PG H:AGS300 3.2 41.0 1.0
CG2 H:THR67 3.8 41.0 1.0
O3G H:AGS300 4.1 41.0 1.0
CA H:THR67 4.1 41.0 1.0
OD2 H:ASP144 4.1 41.0 1.0
OE1 H:GLU145 4.2 41.0 1.0
PB H:AGS300 4.2 41.0 1.0
N H:THR67 4.2 41.0 1.0
OE2 G:GLU162 4.3 41.0 1.0
O3A H:AGS300 4.4 41.0 1.0
O1A H:AGS300 4.5 41.0 1.0
O2G H:AGS300 4.5 41.0 1.0
OD1 H:ASP144 4.5 41.0 1.0
O2A H:AGS300 4.6 41.0 1.0
NH2 G:ARG189 4.7 41.0 1.0
CG H:ASP144 4.7 41.0 1.0
PA H:AGS300 4.7 41.0 1.0
O1B H:AGS300 4.7 41.0 1.0
CD H:GLU145 4.9 41.0 1.0
OE1 G:GLU162 4.9 41.0 1.0
CD G:GLU162 5.0 41.0 1.0

Reference:

J.Park, A.Tsai, E.Mehrotra, M.T.Petassi, S.C.Hsieh, A.Ke, J.E.Peters, E.H.Kellogg. Structural Basis For Target-Site Selection in Rna-Guided Dna Transposition Systems Science 2021.
ISSN: ESSN 1095-9203
DOI: 10.1126/SCIENCE.ABI8976
Page generated: Thu Oct 3 00:26:02 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy