Magnesium in PDB 7mj2: Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn
Enzymatic activity of Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn
All present enzymatic activity of Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn:
2.5.1.143;
2.5.1.143;
Protein crystallography data
The structure of Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn, PDB code: 7mj2
was solved by
S.Chatterjee,
J.A.Rankin,
S.Lagishetty,
J.Hu,
R.P.Hausinger,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 33.98 / 2.80 |
| Space group | P 4 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 120.102, 120.102, 212.575, 90, 90, 90 |
| R / Rfree (%) | 21 / 24.4 |
Other elements in 7mj2:
The structure of Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn also contains other interesting chemical elements:
| Zinc | (Zn) | 2 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn
(pdb code 7mj2). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn, PDB code: 7mj2:
Jump to Magnesium binding site number: 1; 2; 3;
In total 3 binding sites of Magnesium where determined in the Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn, PDB code: 7mj2:
Jump to Magnesium binding site number: 1; 2; 3;
Magnesium binding site 1 out of 3 in 7mj2
Go back to
Magnesium Binding Sites List in 7mj2
Magnesium binding site 1 out
of 3 in the Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn within 5.0Å range:
|
Magnesium binding site 2 out of 3 in 7mj2
Go back to
Magnesium Binding Sites List in 7mj2
Magnesium binding site 2 out
of 3 in the Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn within 5.0Å range:
|
Magnesium binding site 3 out of 3 in 7mj2
Go back to
Magnesium Binding Sites List in 7mj2
Magnesium binding site 3 out
of 3 in the Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Larb, A Carboxylase/Hydrolase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zn within 5.0Å range:
|
Reference:
J.A.Rankin,
S.Chatterjee,
Z.Tariq,
S.Lagishetty,
B.Desguin,
J.Hu,
R.P.Hausinger.
The Larb Carboxylase/Hydrolase Forms A Transient Cysteinyl-Pyridine Intermediate During Nickel-Pincer Nucleotide Cofactor Biosynthesis. Proc.Natl.Acad.Sci.Usa V. 118 2021.
ISSN: ESSN 1091-6490
PubMed: 34548397
DOI: 10.1073/PNAS.2106202118
Page generated: Thu Oct 3 00:58:25 2024
ISSN: ESSN 1091-6490
PubMed: 34548397
DOI: 10.1073/PNAS.2106202118
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