Atomistry » Magnesium » PDB 7mkd-7mqu » 7mp9
Atomistry »
  Magnesium »
    PDB 7mkd-7mqu »
      7mp9 »

Magnesium in PDB 7mp9: Crystal Structure of the Cytosolic Domain of Tribolium Castaneum PINK1 Phosphorylated at SER205 in Complex with Adp Analog

Protein crystallography data

The structure of Crystal Structure of the Cytosolic Domain of Tribolium Castaneum PINK1 Phosphorylated at SER205 in Complex with Adp Analog, PDB code: 7mp9 was solved by S.Rasool, S.Veyron, J.F.Trempe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.67 / 2.80
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 52.736, 52.736, 547.944, 90, 90, 120
R / Rfree (%) 24.7 / 30.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Cytosolic Domain of Tribolium Castaneum PINK1 Phosphorylated at SER205 in Complex with Adp Analog (pdb code 7mp9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Cytosolic Domain of Tribolium Castaneum PINK1 Phosphorylated at SER205 in Complex with Adp Analog, PDB code: 7mp9:

Magnesium binding site 1 out of 1 in 7mp9

Go back to Magnesium Binding Sites List in 7mp9
Magnesium binding site 1 out of 1 in the Crystal Structure of the Cytosolic Domain of Tribolium Castaneum PINK1 Phosphorylated at SER205 in Complex with Adp Analog


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Cytosolic Domain of Tribolium Castaneum PINK1 Phosphorylated at SER205 in Complex with Adp Analog within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:44.9
occ:1.00
O1A A:AN2609 2.1 88.7 1.0
CB A:ASN342 3.2 24.8 1.0
ND2 A:ASN342 3.4 24.3 1.0
OD2 A:ASP359 3.5 36.5 1.0
PA A:AN2609 3.6 88.4 1.0
CG A:ASN342 3.7 24.7 1.0
NZ A:LYS339 3.8 23.6 1.0
C5' A:AN2609 3.8 63.6 1.0
CE A:LYS339 3.9 22.9 1.0
CB A:ASP359 4.0 34.7 1.0
CA A:ASN342 4.1 24.4 1.0
O5' A:AN2609 4.1 63.5 1.0
N A:ASN342 4.1 24.8 1.0
CG A:ASP359 4.2 35.9 1.0
O1B A:AN2609 4.2 86.6 1.0
C A:ASP341 4.3 25.1 1.0
O A:ASP341 4.4 25.6 1.0
CB A:ASP341 4.5 27.9 1.0
O2A A:AN2609 4.5 83.8 1.0
O3A A:AN2609 4.5 138.3 1.0
OD1 A:ASP337 4.7 24.3 1.0
OD1 A:ASN342 4.8 24.5 1.0
PB A:AN2609 5.0 90.6 1.0

Reference:

S.Rasool, S.Veyron, M.A.Eldeeb, N.Soya, G.L.Lukacs, E.A.Fon, J.F.Trempe. Mechanism of PINK1 Activation By Autophosphorylation and Insights Into Assembly on the Tom Complex To Be Published.
Page generated: Thu Oct 3 01:05:02 2024

Last articles

Mg in 8CIP
Mg in 8CGU
Mg in 8CHU
Mg in 8CGZ
Mg in 8CGR
Mg in 8CGJ
Mg in 8CAH
Mg in 8CGI
Mg in 8CEP
Mg in 8CF8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy