Magnesium in PDB 7n1r: A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip

All present enzymatic activity of A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip:
3.6.4.10;

The structure of A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip, PDB code: 7n1r was solved by J.Yang, F.Musayev, Q.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.31 / 2.03
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	75.988, 76.388, 79.917, 84.88, 62.49, 63.14
R / Rfree (%)	17.4 / 22.3

The binding sites of Magnesium atom in the A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip (pdb code 7n1r). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip, PDB code: 7n1r:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg714 b:23.2 occ:1.00 O4 A:PO4716 2.5 19.3 1.0 O1P A:AMP715 2.6 11.7 1.0 N A:THR38 3.0 10.4 1.0 OG1 A:THR38 3.2 19.3 1.0 N A:TYR39 3.3 11.4 1.0 N A:THR37 3.3 9.7 1.0 N A:GLY227 3.6 10.7 1.0 O A:TYR39 3.7 10.6 1.0 CA A:THR38 3.7 12.2 1.0 O A:HOH896 3.8 21.4 1.0 C5' A:AMP715 3.8 13.2 1.0 P A:AMP715 3.8 13.8 1.0 C A:GLY36 3.8 9.4 1.0 O5' A:AMP715 3.8 13.3 1.0 CA A:GLY227 3.8 10.5 1.0 P A:PO4716 3.9 13.8 1.0 CA A:GLY36 3.9 9.4 1.0 C A:THR37 3.9 10.4 1.0 CB A:THR38 3.9 14.3 1.0 C A:THR38 4.0 11.4 1.0 CA A:THR37 4.0 10.3 1.0 O1 A:PO4716 4.2 17.9 1.0 CB A:THR37 4.2 10.7 1.0 CA A:TYR39 4.3 12.6 1.0 CG2 A:THR38 4.4 15.2 1.0 O A:HOH1032 4.4 24.4 1.0 C A:TYR39 4.4 11.6 1.0 CB A:TYR39 4.6 14.4 1.0 O2 A:PO4716 4.6 18.0 1.0 O A:GLY36 4.6 9.8 1.0 O3P A:AMP715 4.7 13.1 1.0 C4' A:AMP715 4.7 13.2 1.0 O3 A:PO4716 4.7 15.2 1.0 C A:GLY226 4.7 9.6 1.0 C A:GLY227 4.9 10.8 1.0 O2P A:AMP715 4.9 12.8 1.0 OG1 A:THR37 4.9 11.0 1.0 CD2 A:TYR39 5.0 18.5 1.0 CA A:GLY226 5.0 9.9 1.0

Magnesium binding site 2 out of 2 in the A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Bip within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg703 b:22.5 occ:1.00 O4 B:PO4716 2.4 15.8 1.0 O2P B:AMP715 2.5 11.4 1.0 N B:THR38 3.1 10.4 1.0 OG1 B:THR38 3.3 17.2 1.0 N B:THR37 3.3 9.8 1.0 N B:TYR39 3.4 13.0 1.0 N B:GLY227 3.5 9.0 1.0 O B:HOH845 3.7 23.0 1.0 O5' B:AMP715 3.7 12.8 1.0 P B:AMP715 3.7 13.1 1.0 C5' B:AMP715 3.7 12.9 1.0 O B:TYR39 3.8 13.3 1.0 C B:GLY36 3.8 9.3 1.0 CA B:GLY227 3.8 9.1 1.0 P B:PO4716 3.8 13.3 1.0 CA B:GLY36 3.8 8.9 1.0 CA B:THR38 3.9 12.6 1.0 C B:THR37 4.0 10.4 1.0 CB B:THR38 4.1 13.8 1.0 CA B:THR37 4.1 9.8 1.0 O3 B:PO4716 4.1 17.3 1.0 C B:THR38 4.1 12.6 1.0 CB B:THR37 4.3 10.0 1.0 CA B:TYR39 4.4 14.3 1.0 CG2 B:THR38 4.5 14.1 1.0 C B:TYR39 4.5 15.1 1.0 O2 B:PO4716 4.6 16.5 1.0 O3P B:AMP715 4.6 11.8 1.0 O B:HOH965 4.6 25.5 1.0 CB B:TYR39 4.7 16.0 1.0 O B:GLY36 4.7 9.5 1.0 O1 B:PO4716 4.7 13.4 1.0 C4' B:AMP715 4.7 12.5 1.0 C B:GLY226 4.7 8.5 1.0 C B:GLY227 4.8 9.5 1.0 O1P B:AMP715 4.8 14.0 1.0 OG1 B:THR37 5.0 9.6 1.0 CA B:GLY226 5.0 8.4 1.0

H.Li, F.N.Musayev, J.Yang, J.Su, Q.Liu, W.Wang, X.Fang, L.Zhou, Q.Liu. A Novel and Unique Atp Hydrolysis to Amp By A Human HSP70 Binding Immunoglobin Protein (Bip). Protein Sci. V. 31 797 2022.
ISSN: ESSN 1469-896X
PubMed: 34941000
DOI: 10.1002/PRO.4267