Magnesium in PDB 7n32: Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Magnesium atom in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
(pdb code 7n32). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 12 binding sites of Magnesium where determined in the
Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein, PDB code: 7n32:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 1 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
x:Mg501
b:114.7
occ:1.00
|
O2G
|
w:GTP501
|
2.0
|
174.4
|
1.0
|
|
O1B
|
w:GTP501
|
2.0
|
189.8
|
1.0
|
|
O3A
|
w:GTP501
|
2.3
|
171.8
|
1.0
|
|
PB
|
w:GTP501
|
2.4
|
181.2
|
1.0
|
|
O1A
|
w:GTP501
|
2.5
|
172.6
|
1.0
|
|
PG
|
w:GTP501
|
2.7
|
180.7
|
1.0
|
|
O3B
|
w:GTP501
|
2.7
|
180.1
|
1.0
|
|
PA
|
w:GTP501
|
2.8
|
168.4
|
1.0
|
|
O3G
|
w:GTP501
|
3.1
|
185.4
|
1.0
|
|
NZ
|
x:LYS252
|
3.3
|
255.1
|
1.0
|
|
O2A
|
w:GTP501
|
3.4
|
163.6
|
1.0
|
|
CB
|
w:GLN11
|
3.6
|
190.7
|
1.0
|
|
O2B
|
w:GTP501
|
3.9
|
183.5
|
1.0
|
|
OE1
|
w:GLN11
|
4.0
|
227.8
|
1.0
|
|
N
|
w:GLN11
|
4.1
|
188.8
|
1.0
|
|
O1G
|
w:GTP501
|
4.1
|
181.0
|
1.0
|
|
OE1
|
w:GLU71
|
4.2
|
211.2
|
1.0
|
|
O5'
|
w:GTP501
|
4.2
|
187.2
|
1.0
|
|
CA
|
w:GLN11
|
4.5
|
184.1
|
1.0
|
|
CE
|
x:LYS252
|
4.5
|
250.6
|
1.0
|
|
CG
|
w:GLN11
|
4.8
|
200.1
|
1.0
|
|
CD
|
w:GLN11
|
4.8
|
213.5
|
1.0
|
|
Magnesium binding site 2 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 2 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
u:Mg502
b:98.5
occ:1.00
|
O2G
|
u:GTP501
|
1.8
|
131.2
|
1.0
|
|
O1B
|
u:GTP501
|
2.6
|
113.7
|
1.0
|
|
PG
|
u:GTP501
|
2.9
|
133.4
|
1.0
|
|
OE1
|
u:GLU71
|
3.0
|
223.2
|
1.0
|
|
O3G
|
u:GTP501
|
3.2
|
132.6
|
1.0
|
|
O3B
|
u:GTP501
|
3.4
|
121.1
|
1.0
|
|
PB
|
u:GTP501
|
3.5
|
109.5
|
1.0
|
|
NZ
|
v:LYS252
|
3.7
|
221.4
|
1.0
|
|
CB
|
u:GLN11
|
3.8
|
178.8
|
1.0
|
|
O1A
|
u:GTP501
|
3.8
|
142.0
|
1.0
|
|
O3A
|
u:GTP501
|
3.8
|
120.9
|
1.0
|
|
OE1
|
u:GLN11
|
4.1
|
212.9
|
1.0
|
|
N
|
u:GLN11
|
4.2
|
160.4
|
1.0
|
|
CD
|
u:GLU71
|
4.2
|
225.3
|
1.0
|
|
O1G
|
u:GTP501
|
4.2
|
137.8
|
1.0
|
|
OD1
|
u:ASP69
|
4.3
|
188.9
|
1.0
|
|
PA
|
u:GTP501
|
4.3
|
138.7
|
1.0
|
|
OD2
|
u:ASP69
|
4.4
|
193.4
|
1.0
|
|
CB
|
u:GLU71
|
4.5
|
214.8
|
1.0
|
|
CA
|
u:GLN11
|
4.5
|
169.2
|
1.0
|
|
CG
|
u:ASP69
|
4.8
|
190.2
|
1.0
|
|
OG1
|
u:THR145
|
4.8
|
181.3
|
1.0
|
|
CD
|
u:GLN11
|
4.9
|
202.4
|
1.0
|
|
O2A
|
u:GTP501
|
4.9
|
135.9
|
1.0
|
|
O2B
|
u:GTP501
|
4.9
|
113.0
|
1.0
|
|
CG
|
u:GLN11
|
4.9
|
189.2
|
1.0
|
|
CG
|
u:GLU71
|
4.9
|
223.7
|
1.0
|
|
O
|
v:ASN247
|
5.0
|
226.5
|
1.0
|
|
CE
|
v:LYS252
|
5.0
|
222.1
|
1.0
|
|
CB
|
v:ASN247
|
5.0
|
213.1
|
1.0
|
|
Magnesium binding site 3 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 3 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
t:Mg501
b:47.2
occ:1.00
|
O2G
|
s:GTP501
|
1.9
|
111.7
|
1.0
|
|
PG
|
s:GTP501
|
2.6
|
115.9
|
1.0
|
|
O1B
|
s:GTP501
|
2.6
|
97.5
|
1.0
|
|
O3G
|
s:GTP501
|
2.6
|
119.0
|
1.0
|
|
O3A
|
s:GTP501
|
2.9
|
97.7
|
1.0
|
|
O1A
|
s:GTP501
|
2.9
|
113.2
|
1.0
|
|
PB
|
s:GTP501
|
3.0
|
92.2
|
1.0
|
|
O3B
|
s:GTP501
|
3.1
|
103.0
|
1.0
|
|
PA
|
s:GTP501
|
3.3
|
107.9
|
1.0
|
|
NZ
|
t:LYS252
|
3.5
|
204.2
|
1.0
|
|
CB
|
s:GLN11
|
3.5
|
201.4
|
1.0
|
|
OE1
|
s:GLU71
|
3.7
|
186.6
|
1.0
|
|
O2A
|
s:GTP501
|
3.8
|
102.5
|
1.0
|
|
OE1
|
s:GLN11
|
3.8
|
223.2
|
1.0
|
|
O1G
|
s:GTP501
|
4.0
|
117.5
|
1.0
|
|
N
|
s:GLN11
|
4.1
|
181.3
|
1.0
|
|
CA
|
s:GLN11
|
4.5
|
191.4
|
1.0
|
|
O2B
|
s:GTP501
|
4.5
|
96.2
|
1.0
|
|
CD
|
s:GLN11
|
4.6
|
213.4
|
1.0
|
|
CG
|
s:GLN11
|
4.7
|
204.2
|
1.0
|
|
CE
|
t:LYS252
|
4.7
|
200.7
|
1.0
|
|
O5'
|
s:GTP501
|
4.8
|
132.3
|
1.0
|
|
OD1
|
s:ASP69
|
4.8
|
143.2
|
1.0
|
|
CD
|
s:GLU71
|
4.8
|
195.4
|
1.0
|
|
OD2
|
s:ASP69
|
4.9
|
140.0
|
1.0
|
|
Magnesium binding site 4 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 4 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
q:Mg502
b:120.0
occ:1.00
|
O2G
|
q:GTP501
|
2.0
|
155.7
|
1.0
|
|
OE1
|
q:GLU71
|
2.7
|
244.3
|
1.0
|
|
O1B
|
q:GTP501
|
2.9
|
166.0
|
1.0
|
|
PG
|
q:GTP501
|
3.4
|
155.9
|
1.0
|
|
NZ
|
r:LYS252
|
3.6
|
230.5
|
1.0
|
|
O3B
|
q:GTP501
|
3.8
|
158.1
|
1.0
|
|
PB
|
q:GTP501
|
3.8
|
158.1
|
1.0
|
|
CB
|
q:GLN11
|
3.8
|
202.2
|
1.0
|
|
CD
|
q:GLU71
|
3.9
|
239.6
|
1.0
|
|
OE1
|
q:GLN11
|
4.0
|
229.2
|
1.0
|
|
O3A
|
q:GTP501
|
4.0
|
146.9
|
1.0
|
|
O1A
|
q:GTP501
|
4.0
|
144.9
|
1.0
|
|
OD2
|
q:ASP69
|
4.1
|
209.7
|
1.0
|
|
OD1
|
q:ASP69
|
4.3
|
201.9
|
1.0
|
|
CB
|
q:GLU71
|
4.3
|
220.9
|
1.0
|
|
O1G
|
q:GTP501
|
4.3
|
153.8
|
1.0
|
|
O3G
|
q:GTP501
|
4.3
|
157.2
|
1.0
|
|
N
|
q:GLN11
|
4.4
|
199.8
|
1.0
|
|
PA
|
q:GTP501
|
4.6
|
142.9
|
1.0
|
|
CG
|
q:ASP69
|
4.6
|
211.7
|
1.0
|
|
CA
|
q:GLN11
|
4.7
|
198.9
|
1.0
|
|
CD
|
q:GLN11
|
4.7
|
216.8
|
1.0
|
|
CG
|
q:GLU71
|
4.7
|
231.2
|
1.0
|
|
OE2
|
q:GLU71
|
4.8
|
239.8
|
1.0
|
|
CB
|
r:ASN247
|
4.8
|
218.3
|
1.0
|
|
CG
|
q:GLN11
|
4.9
|
206.3
|
1.0
|
|
O
|
r:ASN247
|
4.9
|
212.0
|
1.0
|
|
CE
|
r:LYS252
|
5.0
|
231.4
|
1.0
|
|
Magnesium binding site 5 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 5 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
o:Mg502
b:142.7
occ:1.00
|
O2G
|
o:GTP501
|
2.0
|
152.6
|
1.0
|
|
O3G
|
o:GTP501
|
2.0
|
156.3
|
1.0
|
|
PG
|
o:GTP501
|
2.1
|
154.2
|
1.0
|
|
O3B
|
o:GTP501
|
2.3
|
153.3
|
1.0
|
|
O1B
|
o:GTP501
|
2.3
|
165.0
|
1.0
|
|
O3A
|
o:GTP501
|
2.3
|
161.9
|
1.0
|
|
PB
|
o:GTP501
|
2.4
|
152.8
|
1.0
|
|
O1A
|
o:GTP501
|
3.0
|
185.7
|
1.0
|
|
PA
|
o:GTP501
|
3.1
|
178.4
|
1.0
|
|
O1G
|
o:GTP501
|
3.6
|
154.3
|
1.0
|
|
NZ
|
p:LYS252
|
3.6
|
250.3
|
1.0
|
|
O2A
|
o:GTP501
|
3.7
|
172.2
|
1.0
|
|
CB
|
o:GLN11
|
3.9
|
183.7
|
1.0
|
|
O2B
|
o:GTP501
|
3.9
|
154.9
|
1.0
|
|
OE1
|
o:GLU71
|
4.1
|
184.8
|
1.0
|
|
N
|
o:GLN11
|
4.1
|
180.9
|
1.0
|
|
OE1
|
o:GLN11
|
4.4
|
222.8
|
1.0
|
|
O5'
|
o:GTP501
|
4.5
|
200.1
|
1.0
|
|
CE
|
p:LYS252
|
4.6
|
248.0
|
1.0
|
|
CA
|
o:GLN11
|
4.6
|
180.9
|
1.0
|
|
OG1
|
o:THR145
|
4.7
|
154.0
|
1.0
|
|
OD1
|
o:ASP69
|
4.9
|
177.1
|
1.0
|
|
CB
|
o:THR145
|
5.0
|
152.6
|
1.0
|
|
Magnesium binding site 6 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 6 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
m:Mg502
b:103.9
occ:1.00
|
O2G
|
m:GTP501
|
1.9
|
127.1
|
1.0
|
|
OE1
|
m:GLU71
|
2.6
|
221.1
|
1.0
|
|
O1B
|
m:GTP501
|
3.0
|
130.7
|
1.0
|
|
PG
|
m:GTP501
|
3.2
|
128.0
|
1.0
|
|
O3G
|
m:GTP501
|
3.5
|
120.2
|
1.0
|
|
CD
|
m:GLU71
|
3.8
|
220.0
|
1.0
|
|
O3B
|
m:GTP501
|
3.8
|
121.8
|
1.0
|
|
CB
|
m:GLN11
|
3.9
|
136.5
|
1.0
|
|
PB
|
m:GTP501
|
3.9
|
119.8
|
1.0
|
|
OD1
|
m:ASP69
|
3.9
|
219.1
|
1.0
|
|
NZ
|
n:LYS252
|
4.0
|
206.8
|
1.0
|
|
CB
|
m:GLU71
|
4.0
|
211.2
|
1.0
|
|
OD2
|
m:ASP69
|
4.1
|
223.9
|
1.0
|
|
O3A
|
m:GTP501
|
4.2
|
121.0
|
1.0
|
|
O1A
|
m:GTP501
|
4.2
|
125.9
|
1.0
|
|
OE1
|
m:GLN11
|
4.2
|
177.6
|
1.0
|
|
N
|
m:GLN11
|
4.3
|
146.7
|
1.0
|
|
O1G
|
m:GTP501
|
4.4
|
135.1
|
1.0
|
|
CG
|
m:ASP69
|
4.4
|
222.3
|
1.0
|
|
CG
|
m:GLU71
|
4.5
|
217.0
|
1.0
|
|
CA
|
m:GLN11
|
4.6
|
141.2
|
1.0
|
|
OG1
|
m:THR145
|
4.6
|
153.6
|
1.0
|
|
PA
|
m:GTP501
|
4.7
|
123.8
|
1.0
|
|
OE2
|
m:GLU71
|
4.7
|
216.1
|
1.0
|
|
CD
|
m:GLN11
|
4.8
|
163.5
|
1.0
|
|
CG
|
m:GLN11
|
5.0
|
146.4
|
1.0
|
|
CB
|
n:ASN247
|
5.0
|
171.8
|
1.0
|
|
Magnesium binding site 7 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 7 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
k:Mg502
b:67.9
occ:1.00
|
O2G
|
k:GTP501
|
1.9
|
142.9
|
1.0
|
|
O1B
|
k:GTP501
|
2.5
|
132.5
|
1.0
|
|
OE1
|
k:GLU71
|
2.6
|
240.3
|
1.0
|
|
PG
|
k:GTP501
|
3.2
|
144.1
|
1.0
|
|
PB
|
k:GTP501
|
3.4
|
133.9
|
1.0
|
|
O3B
|
k:GTP501
|
3.5
|
137.9
|
1.0
|
|
NZ
|
l:LYS252
|
3.7
|
241.6
|
1.0
|
|
CB
|
k:GLN11
|
3.8
|
179.0
|
1.0
|
|
CD
|
k:GLU71
|
3.8
|
245.9
|
1.0
|
|
O3A
|
k:GTP501
|
3.9
|
141.1
|
1.0
|
|
OD1
|
k:ASP69
|
4.0
|
193.4
|
1.0
|
|
O1A
|
k:GTP501
|
4.0
|
156.6
|
1.0
|
|
OE1
|
k:GLN11
|
4.1
|
219.5
|
1.0
|
|
O1G
|
k:GTP501
|
4.1
|
145.9
|
1.0
|
|
N
|
k:GLN11
|
4.2
|
150.6
|
1.0
|
|
O3G
|
k:GTP501
|
4.2
|
144.5
|
1.0
|
|
CB
|
k:GLU71
|
4.2
|
246.3
|
1.0
|
|
OD2
|
k:ASP69
|
4.2
|
188.7
|
1.0
|
|
PA
|
k:GTP501
|
4.5
|
154.2
|
1.0
|
|
CA
|
k:GLN11
|
4.5
|
167.5
|
1.0
|
|
CG
|
k:ASP69
|
4.5
|
193.6
|
1.0
|
|
CG
|
k:GLU71
|
4.6
|
251.7
|
1.0
|
|
OE2
|
k:GLU71
|
4.7
|
240.8
|
1.0
|
|
CD
|
k:GLN11
|
4.8
|
203.4
|
1.0
|
|
O2B
|
k:GTP501
|
4.8
|
137.8
|
1.0
|
|
CG
|
k:GLN11
|
4.9
|
190.8
|
1.0
|
|
OG1
|
k:THR145
|
4.9
|
177.9
|
1.0
|
|
O2A
|
k:GTP501
|
4.9
|
156.4
|
1.0
|
|
CB
|
l:ASN247
|
5.0
|
202.8
|
1.0
|
|
Magnesium binding site 8 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 8 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
g:Mg502
b:75.6
occ:1.00
|
O2G
|
g:GTP501
|
1.9
|
129.8
|
1.0
|
|
O1B
|
g:GTP501
|
2.6
|
115.8
|
1.0
|
|
PG
|
g:GTP501
|
2.9
|
133.4
|
1.0
|
|
OE1
|
g:GLU71
|
3.0
|
253.7
|
1.0
|
|
O3G
|
g:GTP501
|
3.2
|
131.7
|
1.0
|
|
O3B
|
g:GTP501
|
3.3
|
124.7
|
1.0
|
|
PB
|
g:GTP501
|
3.4
|
113.0
|
1.0
|
|
NZ
|
h:LYS252
|
3.5
|
210.2
|
1.0
|
|
O1A
|
g:GTP501
|
3.6
|
128.7
|
1.0
|
|
O3A
|
g:GTP501
|
3.7
|
117.8
|
1.0
|
|
CB
|
g:GLN11
|
3.8
|
154.7
|
1.0
|
|
OE1
|
g:GLN11
|
4.0
|
178.7
|
1.0
|
|
CD
|
g:GLU71
|
4.2
|
258.1
|
1.0
|
|
PA
|
g:GTP501
|
4.2
|
126.4
|
1.0
|
|
N
|
g:GLN11
|
4.3
|
156.0
|
1.0
|
|
O1G
|
g:GTP501
|
4.3
|
131.3
|
1.0
|
|
OD1
|
g:ASP69
|
4.4
|
185.4
|
1.0
|
|
OD2
|
g:ASP69
|
4.6
|
190.2
|
1.0
|
|
CB
|
g:GLU71
|
4.6
|
254.6
|
1.0
|
|
CA
|
g:GLN11
|
4.6
|
156.9
|
1.0
|
|
CD
|
g:GLN11
|
4.8
|
167.9
|
1.0
|
|
CE
|
h:LYS252
|
4.8
|
211.8
|
1.0
|
|
O2A
|
g:GTP501
|
4.8
|
125.4
|
1.0
|
|
O2B
|
g:GTP501
|
4.9
|
110.2
|
1.0
|
|
CG
|
g:GLN11
|
4.9
|
158.1
|
1.0
|
|
CG
|
g:ASP69
|
4.9
|
189.7
|
1.0
|
|
OG1
|
g:THR145
|
5.0
|
202.6
|
1.0
|
|
OE2
|
g:GLU71
|
5.0
|
250.9
|
1.0
|
|
CG
|
g:GLU71
|
5.0
|
263.1
|
1.0
|
|
Magnesium binding site 9 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 9 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
e:Mg502
b:104.3
occ:1.00
|
O2G
|
e:GTP501
|
2.4
|
137.0
|
1.0
|
|
OE1
|
e:GLU71
|
2.8
|
269.2
|
1.0
|
|
NZ
|
f:LYS252
|
3.3
|
243.0
|
1.0
|
|
CD
|
e:GLU71
|
3.5
|
266.6
|
1.0
|
|
O1B
|
e:GTP501
|
3.6
|
191.6
|
1.0
|
|
PG
|
e:GTP501
|
3.7
|
136.8
|
1.0
|
|
OE2
|
e:GLU71
|
3.9
|
271.4
|
1.0
|
|
CB
|
f:ASN247
|
4.1
|
198.7
|
1.0
|
|
O3G
|
e:GTP501
|
4.2
|
132.8
|
1.0
|
|
CB
|
e:GLU71
|
4.2
|
245.7
|
1.0
|
|
OE1
|
e:GLN11
|
4.2
|
135.9
|
1.0
|
|
CB
|
e:GLN11
|
4.3
|
152.2
|
1.0
|
|
CG
|
e:GLU71
|
4.4
|
256.1
|
1.0
|
|
O1A
|
e:GTP501
|
4.5
|
203.2
|
1.0
|
|
O3B
|
e:GTP501
|
4.5
|
156.9
|
1.0
|
|
PB
|
e:GTP501
|
4.5
|
189.4
|
1.0
|
|
CE
|
f:LYS252
|
4.7
|
241.4
|
1.0
|
|
OD1
|
e:ASP69
|
4.7
|
313.2
|
1.0
|
|
O
|
f:ASN247
|
4.7
|
170.0
|
1.0
|
|
O3A
|
e:GTP501
|
4.7
|
179.7
|
1.0
|
|
OD2
|
e:ASP98
|
4.8
|
208.3
|
1.0
|
|
O1G
|
e:GTP501
|
4.8
|
140.3
|
1.0
|
|
C
|
f:ASN247
|
4.8
|
177.0
|
1.0
|
|
CB
|
e:ASP98
|
4.9
|
225.4
|
1.0
|
|
CD
|
e:GLN11
|
4.9
|
142.9
|
1.0
|
|
CA
|
f:ASN247
|
4.9
|
179.7
|
1.0
|
|
OD1
|
f:ASN247
|
5.0
|
241.2
|
1.0
|
|
Magnesium binding site 10 out
of 12 in 7n32
Go back to
Magnesium Binding Sites List in 7n32
Magnesium binding site 10 out
of 12 in the Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Protofilaments of Microtubule Doublets Bound to Outer-Arm Dynein within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
c:Mg502
b:26.8
occ:1.00
|
O2G
|
c:GTP501
|
2.2
|
130.2
|
1.0
|
|
O1B
|
c:GTP501
|
2.5
|
97.0
|
1.0
|
|
OE1
|
c:GLU71
|
3.3
|
257.2
|
1.0
|
|
CB
|
c:GLN11
|
3.5
|
229.6
|
1.0
|
|
PB
|
c:GTP501
|
3.5
|
92.8
|
1.0
|
|
O1A
|
c:GTP501
|
3.5
|
152.3
|
1.0
|
|
PG
|
c:GTP501
|
3.5
|
125.8
|
1.0
|
|
O3A
|
c:GTP501
|
3.6
|
121.8
|
1.0
|
|
N
|
c:GLN11
|
3.8
|
208.5
|
1.0
|
|
PA
|
c:GTP501
|
3.8
|
154.6
|
1.0
|
|
O3B
|
c:GTP501
|
3.8
|
105.1
|
1.0
|
|
O2A
|
c:GTP501
|
3.8
|
149.7
|
1.0
|
|
NZ
|
d:LYS252
|
3.9
|
202.1
|
1.0
|
|
OE1
|
c:GLN11
|
4.1
|
258.4
|
1.0
|
|
OD1
|
c:ASP69
|
4.2
|
185.1
|
1.0
|
|
O1G
|
c:GTP501
|
4.2
|
129.8
|
1.0
|
|
CA
|
c:GLN11
|
4.2
|
234.8
|
1.0
|
|
OG1
|
c:THR145
|
4.4
|
144.1
|
1.0
|
|
OD2
|
c:ASP69
|
4.5
|
186.8
|
1.0
|
|
CD
|
c:GLU71
|
4.5
|
262.5
|
1.0
|
|
O3G
|
c:GTP501
|
4.7
|
119.5
|
1.0
|
|
CG
|
c:GLN11
|
4.7
|
228.4
|
1.0
|
|
CG
|
c:ASP69
|
4.7
|
183.0
|
1.0
|
|
CB
|
c:GLU71
|
4.7
|
249.9
|
1.0
|
|
CD
|
c:GLN11
|
4.7
|
244.1
|
1.0
|
|
C
|
c:GLY10
|
4.8
|
158.2
|
1.0
|
|
CA
|
c:GLY10
|
4.9
|
133.7
|
1.0
|
|
O2B
|
c:GTP501
|
4.9
|
87.3
|
1.0
|
|
O
|
d:ASN247
|
5.0
|
270.9
|
1.0
|
|
Reference:
R.Qinhui,
Z.Kai.
Cryo-Em Structures of Outer-Arm Dynein Array Bound to Microtubule Doublet Reveal A Mechanism For Motor Coordination To Be Published.
Page generated: Thu Oct 3 01:13:17 2024
|
