Magnesium in PDB 7n46: Adp-Binding State of the Nucleotide-Binding Domain of HSP70 Dnak

The structure of Adp-Binding State of the Nucleotide-Binding Domain of HSP70 Dnak, PDB code: 7n46 was solved by W.Wang, W.A.Hendrickson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.25 / 2.21
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	101.646, 101.646, 153.444, 90, 90, 120
R / Rfree (%)	21.6 / 24.8

The binding sites of Magnesium atom in the Adp-Binding State of the Nucleotide-Binding Domain of HSP70 Dnak (pdb code 7n46). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Adp-Binding State of the Nucleotide-Binding Domain of HSP70 Dnak, PDB code: 7n46:

Magnesium binding site 1 out of 1 in the Adp-Binding State of the Nucleotide-Binding Domain of HSP70 Dnak


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Adp-Binding State of the Nucleotide-Binding Domain of HSP70 Dnak within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg403 b:34.0 occ:1.00 O A:HOH503 1.9 29.9 1.0 O A:HOH609 2.1 26.4 1.0 O A:HOH502 2.2 32.1 1.0 O2B A:ADP401 2.2 32.1 1.0 O A:HOH559 2.2 29.5 1.0 O3 A:PO4404 2.2 29.9 1.0 PB A:ADP401 3.3 35.2 1.0 O1B A:ADP401 3.4 32.7 1.0 P A:PO4404 3.4 33.6 1.0 O4 A:PO4404 3.5 27.4 1.0 O A:HOH517 3.9 28.6 1.0 O1A A:ADP401 4.0 26.9 1.0 OD1 A:ASP194 4.0 25.3 1.0 O A:HOH551 4.1 31.5 1.0 OD2 A:ASP8 4.2 24.2 1.0 O A:HOH521 4.2 24.0 1.0 O1 A:PO4404 4.2 29.2 1.0 OD1 A:ASP8 4.3 22.8 1.0 O3B A:ADP401 4.3 29.5 1.0 OD2 A:ASP194 4.4 24.8 1.0 O3A A:ADP401 4.5 29.9 1.0 CG A:ASP194 4.6 23.7 1.0 O2 A:PO4404 4.6 33.3 1.0 CG A:ASP8 4.7 22.7 1.0 OE1 A:GLU171 4.7 24.7 1.0 PA A:ADP401 4.9 24.3 1.0 CA A:GLY10 4.9 21.0 1.0 CA A:GLY196 5.0 24.3 1.0 CG2 A:VAL371 5.0 20.6 1.0

W.Wang, W.A.Hendrickson. Visualization of HSP70-Catalyzed Atp Hydrolysis To Be Published.