Magnesium in PDB 7ni6: Human Atm Kinase with Bound Atpys

Enzymatic activity of Human Atm Kinase with Bound Atpys

All present enzymatic activity of Human Atm Kinase with Bound Atpys:
2.7.11.1;

Other elements in 7ni6:

The structure of Human Atm Kinase with Bound Atpys also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human Atm Kinase with Bound Atpys (pdb code 7ni6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Human Atm Kinase with Bound Atpys, PDB code: 7ni6:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7ni6

Go back to Magnesium Binding Sites List in 7ni6
Magnesium binding site 1 out of 2 in the Human Atm Kinase with Bound Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Atm Kinase with Bound Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg3203

b:57.7
occ:1.00
O2A A:AGS3202 2.1 67.8 1.0
OD1 A:ASN2875 2.3 35.5 1.0
O2G A:AGS3202 2.7 67.8 1.0
O2B A:AGS3202 2.9 67.8 1.0
OD2 A:ASP2889 3.1 44.1 1.0
CG A:ASN2875 3.5 35.5 1.0
PA A:AGS3202 3.7 67.8 1.0
CG A:ASP2889 3.9 44.1 1.0
PG A:AGS3202 3.9 67.8 1.0
CB A:ASP2889 3.9 44.1 1.0
S1G A:AGS3202 4.1 67.8 1.0
PB A:AGS3202 4.2 67.8 1.0
CE1 A:HIS2872 4.2 35.9 1.0
ND2 A:ASN2875 4.2 35.5 1.0
O A:GLN2874 4.2 36.5 1.0
NE2 A:HIS2872 4.3 35.9 1.0
O3A A:AGS3202 4.4 67.8 1.0
O5' A:AGS3202 4.5 67.8 1.0
O1A A:AGS3202 4.5 67.8 1.0
O3B A:AGS3202 4.6 67.8 1.0
C A:GLN2874 4.6 36.5 1.0
CA A:ASN2875 4.6 35.5 1.0
CB A:ASN2875 4.7 35.5 1.0
N A:ASN2875 4.8 35.5 1.0
OD1 A:ASP2889 5.0 44.1 1.0
CB A:GLN2874 5.0 36.5 1.0

Magnesium binding site 2 out of 2 in 7ni6

Go back to Magnesium Binding Sites List in 7ni6
Magnesium binding site 2 out of 2 in the Human Atm Kinase with Bound Atpys


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Human Atm Kinase with Bound Atpys within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg3203

b:50.8
occ:1.00
O1B B:AGS3202 2.3 67.0 1.0
OD1 B:ASN2875 2.4 35.5 1.0
OD2 B:ASP2889 2.4 44.3 1.0
O2A B:AGS3202 2.7 67.0 1.0
CG B:ASP2889 3.4 44.3 1.0
CG B:ASN2875 3.5 35.5 1.0
O2G B:AGS3202 3.5 67.0 1.0
PA B:AGS3202 3.6 67.0 1.0
CB B:ASP2889 3.6 44.3 1.0
PB B:AGS3202 3.7 67.0 1.0
O1A B:AGS3202 3.8 67.0 1.0
ND2 B:ASN2875 4.0 35.5 1.0
O3A B:AGS3202 4.2 67.0 1.0
NE2 B:HIS2872 4.3 36.2 1.0
CE1 B:HIS2872 4.3 36.2 1.0
PG B:AGS3202 4.6 67.0 1.0
O B:GLN2874 4.6 39.3 1.0
OD1 B:ASP2889 4.6 44.3 1.0
O2B B:AGS3202 4.7 67.0 1.0
O3B B:AGS3202 4.7 67.0 1.0
CB B:ASN2875 4.8 35.5 1.0
S1G B:AGS3202 4.8 67.0 1.0
CA B:ASN2875 4.9 35.5 1.0
C B:GLN2874 5.0 39.3 1.0

Reference:

K.Stakyte, M.Rotheneder, K.Lammens, J.D.Bartho, U.Graedler, T.Fuchss, U.Pehl, A.Alt, E.Van De Logt, K.P.Hopfner. Molecular Basis of Human Atm Kinase Inhibition To Be Published.
Page generated: Fri Sep 24 15:26:22 2021

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