Magnesium in PDB 7nrg: Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2- Amino-1-(4-Fluorophenyl)Ethanol

Protein crystallography data

The structure of Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2- Amino-1-(4-Fluorophenyl)Ethanol, PDB code: 7nrg was solved by M.Gardonyi, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.81 / 1.57
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 57.878, 57.878, 159.1, 90, 90, 120
R / Rfree (%) 18.2 / 20.5

Other elements in 7nrg:

The structure of Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2- Amino-1-(4-Fluorophenyl)Ethanol also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms
Fluorine (F) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2- Amino-1-(4-Fluorophenyl)Ethanol (pdb code 7nrg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2- Amino-1-(4-Fluorophenyl)Ethanol, PDB code: 7nrg:

Magnesium binding site 1 out of 1 in 7nrg

Go back to Magnesium Binding Sites List in 7nrg
Magnesium binding site 1 out of 1 in the Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2- Amino-1-(4-Fluorophenyl)Ethanol


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2- Amino-1-(4-Fluorophenyl)Ethanol within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg202

b:27.6
occ:0.43
O B:HOH359 2.0 21.4 0.4
O A:HOH318 2.0 22.7 0.4
O B:HOH311 2.0 21.4 0.4
O B:HOH313 2.2 23.4 0.4
O A:HOH363 2.2 25.4 0.4
O B:HOH361 2.3 21.6 0.4
HG1 B:THR24 3.3 41.5 1.0
HG21 B:THR24 3.4 60.1 1.0
HE1 B:TYR68 3.4 28.2 1.0
O B:HOH333 3.7 23.6 1.0
O B:HOH317 4.0 34.0 1.0
HD1 B:TYR68 4.0 25.2 1.0
OG1 B:THR24 4.1 34.6 1.0
O A:HOH327 4.1 27.6 1.0
CE1 B:TYR68 4.2 23.5 1.0
O B:HOH328 4.2 29.0 1.0
CG2 B:THR24 4.2 50.0 1.0
HB3 B:ASP17 4.3 29.8 1.0
OD2 A:ASP91 4.4 24.1 1.0
O B:HOH308 4.4 28.3 1.0
HB B:THR24 4.4 47.7 1.0
CB B:THR24 4.5 39.7 1.0
CD1 B:TYR68 4.5 21.0 1.0
OD2 B:ASP17 4.5 25.9 1.0
HG23 B:THR24 4.7 60.1 1.0
HG22 B:THR24 4.8 60.1 1.0
HB2 B:ASP17 4.9 29.8 1.0
CB B:LYS26 4.9 40.5 1.0
H B:PHE67 5.0 23.6 1.0
CB B:ASP17 5.0 24.8 1.0

Reference:

M.Gardonyi, A.Heine, G.Klebe. Crystal Structure of A Shortened Ipgc Variant in Complex with (1R)-2-Amino-1-(4-Fluorophenyl)Ethanol To Be Published.
Page generated: Thu Oct 3 02:11:59 2024

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