Magnesium in PDB 7o1v: Structure of A Minimal Photosystem I

All present enzymatic activity of Structure of A Minimal Photosystem I:
1.97.1.12;

The structure of Structure of A Minimal Photosystem I also contains other interesting chemical elements:

Iron

(Fe)

12 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 80; Page 9, Binding sites: 81 - 88;

Binding sites:

The binding sites of Magnesium atom in the Structure of A Minimal Photosystem I (pdb code 7o1v). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 88 binding sites of Magnesium where determined in the Structure of A Minimal Photosystem I, PDB code: 7o1v:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1011 b:49.9 occ:1.00 MG A:CLA1011 0.0 49.9 1.0 ND A:CLA1011 2.0 49.9 1.0 NB A:CLA1011 2.0 49.9 1.0 NC A:CLA1011 2.1 49.9 1.0 NA A:CLA1011 2.2 49.9 1.0 C4D A:CLA1011 2.9 49.9 1.0 C4B A:CLA1011 3.0 49.9 1.0 C1C A:CLA1011 3.1 49.9 1.0 C1B A:CLA1011 3.1 49.9 1.0 C1D A:CLA1011 3.1 49.9 1.0 C4A A:CLA1011 3.1 49.9 1.0 C4C A:CLA1011 3.2 49.9 1.0 C1A A:CLA1011 3.2 49.9 1.0 NE2 A:HIS676 3.2 76.5 1.0 CHC A:CLA1011 3.3 49.9 1.0 CHB A:CLA1011 3.4 49.9 1.0 CE1 A:HIS676 3.4 76.5 1.0 CHA A:CLA1011 3.5 49.9 1.0 CHD A:CLA1011 3.5 49.9 1.0 CBB B:CLA1021 3.7 49.6 1.0 CHC B:CLA1021 4.0 49.6 1.0 C4B B:CLA1021 4.0 49.6 1.0 C3B B:CLA1021 4.1 49.6 1.0 C3D A:CLA1011 4.1 49.9 1.0 CAB B:CLA1021 4.2 49.6 1.0 C3B A:CLA1011 4.2 49.9 1.0 C2B A:CLA1011 4.3 49.9 1.0 C2D A:CLA1011 4.3 49.9 1.0 C2C A:CLA1011 4.4 49.9 1.0 C3C A:CLA1011 4.4 49.9 1.0 CD2 A:HIS676 4.4 76.5 1.0 C1C B:CLA1021 4.5 49.6 1.0 C3A A:CLA1011 4.5 49.9 1.0 C2A A:CLA1011 4.5 49.9 1.0 ND1 A:HIS676 4.6 76.5 1.0 NB B:CLA1021 4.7 49.6 1.0 C2B B:CLA1021 4.8 49.6 1.0 CMC B:CLA1021 4.9 49.6 1.0 C2C B:CLA1021 4.9 49.6 1.0 CBD A:CLA1011 4.9 49.9 1.0

Magnesium binding site 2 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1012 b:53.0 occ:1.00 MG A:CLA1012 0.0 53.0 1.0 ND A:CLA1012 2.0 53.0 1.0 NB A:CLA1012 2.0 53.0 1.0 NC A:CLA1012 2.1 53.0 1.0 NA A:CLA1012 2.2 53.0 1.0 C4D A:CLA1012 2.9 53.0 1.0 C4B A:CLA1012 3.0 53.0 1.0 C1C A:CLA1012 3.0 53.0 1.0 C1B A:CLA1012 3.1 53.0 1.0 C1D A:CLA1012 3.1 53.0 1.0 C4A A:CLA1012 3.2 53.0 1.0 C4C A:CLA1012 3.2 53.0 1.0 C1A A:CLA1012 3.2 53.0 1.0 CHC A:CLA1012 3.3 53.0 1.0 CBB A:CLA1013 3.4 59.4 1.0 CHB A:CLA1012 3.4 53.0 1.0 CHA A:CLA1012 3.4 53.0 1.0 CHD A:CLA1012 3.5 53.0 1.0 CAB A:CLA1013 3.9 59.4 1.0 CB A:ALA680 4.1 76.5 1.0 C3D A:CLA1012 4.1 53.0 1.0 C3B A:CLA1012 4.2 53.0 1.0 C2B A:CLA1012 4.3 53.0 1.0 C2D A:CLA1012 4.3 53.0 1.0 C2C A:CLA1012 4.4 53.0 1.0 C4 B:CLA1021 4.4 49.6 1.0 C3C A:CLA1012 4.4 53.0 1.0 OD1 B:ASN582 4.4 76.5 1.0 C3A A:CLA1012 4.5 53.0 1.0 C2A A:CLA1012 4.5 53.0 1.0 CBD A:CLA1012 4.9 53.0 1.0 C3B A:CLA1013 4.9 59.4 1.0

Magnesium binding site 3 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1101 b:80.2 occ:1.00 MG A:CLA1101 0.0 80.2 1.0 ND A:CLA1101 2.0 80.2 1.0 NB A:CLA1101 2.0 80.2 1.0 NC A:CLA1101 2.1 80.2 1.0 NA A:CLA1101 2.2 80.2 1.0 C4D A:CLA1101 2.9 80.2 1.0 C4B A:CLA1101 3.0 80.2 1.0 C1C A:CLA1101 3.0 80.2 1.0 C1B A:CLA1101 3.1 80.2 1.0 NE2 A:HIS52 3.1 76.5 1.0 C1D A:CLA1101 3.1 80.2 1.0 C4A A:CLA1101 3.2 80.2 1.0 C1A A:CLA1101 3.2 80.2 1.0 C4C A:CLA1101 3.2 80.2 1.0 CHC A:CLA1101 3.3 80.2 1.0 CE1 A:HIS52 3.4 76.5 1.0 CHB A:CLA1101 3.4 80.2 1.0 CHA A:CLA1101 3.4 80.2 1.0 CHD A:CLA1101 3.5 80.2 1.0 C3D A:CLA1101 4.2 80.2 1.0 C20 A:CLA1101 4.2 80.2 1.0 C3B A:CLA1101 4.3 80.2 1.0 C2B A:CLA1101 4.3 80.2 1.0 C2D A:CLA1101 4.3 80.2 1.0 C2C A:CLA1101 4.3 80.2 1.0 CD2 A:HIS52 4.4 76.5 1.0 C3C A:CLA1101 4.4 80.2 1.0 C3A A:CLA1101 4.5 80.2 1.0 C2A A:CLA1101 4.5 80.2 1.0 ND1 A:HIS52 4.6 76.5 1.0 CBD A:CLA1101 4.9 80.2 1.0

Magnesium binding site 4 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1102 b:76.7 occ:1.00 MG A:CLA1102 0.0 76.7 1.0 ND A:CLA1102 2.0 76.7 1.0 NB A:CLA1102 2.0 76.7 1.0 NC A:CLA1102 2.1 76.7 1.0 NA A:CLA1102 2.2 76.7 1.0 C4D A:CLA1102 2.9 76.7 1.0 C4B A:CLA1102 3.0 76.7 1.0 C1C A:CLA1102 3.0 76.7 1.0 C1B A:CLA1102 3.1 76.7 1.0 C1D A:CLA1102 3.1 76.7 1.0 C4A A:CLA1102 3.2 76.7 1.0 C4C A:CLA1102 3.2 76.7 1.0 C1A A:CLA1102 3.2 76.7 1.0 CE1 A:HIS56 3.3 76.5 1.0 NE2 A:HIS56 3.3 76.5 1.0 CHC A:CLA1102 3.3 76.7 1.0 CHB A:CLA1102 3.4 76.7 1.0 CHA A:CLA1102 3.5 76.7 1.0 CHD A:CLA1102 3.5 76.7 1.0 C3D A:CLA1102 4.1 76.7 1.0 C3B A:CLA1102 4.2 76.7 1.0 C2B A:CLA1102 4.3 76.7 1.0 C2D A:CLA1102 4.3 76.7 1.0 ND1 A:HIS56 4.3 76.5 1.0 C2C A:CLA1102 4.4 76.7 1.0 C3C A:CLA1102 4.4 76.7 1.0 C10 A:CLA1109 4.4 82.8 1.0 CD2 A:HIS56 4.4 76.5 1.0 C3A A:CLA1102 4.5 76.7 1.0 C2A A:CLA1102 4.5 76.7 1.0 C5 A:CLA1109 4.8 82.8 1.0 C7 A:CLA1109 4.8 82.8 1.0 CBD A:CLA1102 4.9 76.7 1.0 C11 A:CLA1109 5.0 82.8 1.0 CG A:HIS56 5.0 76.5 1.0

Magnesium binding site 5 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1103 b:62.8 occ:1.00 MG A:CLA1103 0.0 62.8 1.0 ND A:CLA1103 2.0 62.8 1.0 NB A:CLA1103 2.0 62.8 1.0 NC A:CLA1103 2.1 62.8 1.0 NA A:CLA1103 2.2 62.8 1.0 C4D A:CLA1103 2.9 62.8 1.0 C4B A:CLA1103 3.0 62.8 1.0 C1C A:CLA1103 3.0 62.8 1.0 C1B A:CLA1103 3.1 62.8 1.0 C1D A:CLA1103 3.1 62.8 1.0 C4A A:CLA1103 3.1 62.8 1.0 C4C A:CLA1103 3.2 62.8 1.0 C1A A:CLA1103 3.2 62.8 1.0 NE2 A:HIS76 3.3 76.5 1.0 CHC A:CLA1103 3.3 62.8 1.0 CMB A:CLA1128 3.4 61.9 1.0 CHB A:CLA1103 3.4 62.8 1.0 CHA A:CLA1103 3.5 62.8 1.0 CHD A:CLA1103 3.5 62.8 1.0 CD2 A:HIS76 3.9 76.5 1.0 CE1 A:HIS76 4.1 76.5 1.0 C3D A:CLA1103 4.1 62.8 1.0 C3B A:CLA1103 4.2 62.8 1.0 C2B A:CLA1103 4.3 62.8 1.0 C2D A:CLA1103 4.3 62.8 1.0 C2C A:CLA1103 4.3 62.8 1.0 C3C A:CLA1103 4.4 62.8 1.0 C3A A:CLA1103 4.5 62.8 1.0 C2A A:CLA1103 4.5 62.8 1.0 CG2 A:ILE72 4.8 76.5 1.0 C2B A:CLA1128 4.8 61.9 1.0 CBB A:CLA1128 4.9 61.9 1.0 CG A:HIS76 4.9 76.5 1.0 CBD A:CLA1103 4.9 62.8 1.0 ND1 A:HIS76 5.0 76.5 1.0

Magnesium binding site 6 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1104 b:60.4 occ:1.00 MG A:CLA1104 0.0 60.4 1.0 ND A:CLA1104 2.0 60.4 1.0 NB A:CLA1104 2.0 60.4 1.0 NC A:CLA1104 2.1 60.4 1.0 NA A:CLA1104 2.2 60.4 1.0 C4D A:CLA1104 2.9 60.4 1.0 C4B A:CLA1104 3.0 60.4 1.0 C1C A:CLA1104 3.0 60.4 1.0 NE2 A:HIS79 3.1 76.5 1.0 C1B A:CLA1104 3.1 60.4 1.0 C1D A:CLA1104 3.1 60.4 1.0 C4A A:CLA1104 3.2 60.4 1.0 C4C A:CLA1104 3.2 60.4 1.0 C1A A:CLA1104 3.2 60.4 1.0 CHC A:CLA1104 3.3 60.4 1.0 CHB A:CLA1104 3.4 60.4 1.0 CHA A:CLA1104 3.5 60.4 1.0 CHD A:CLA1104 3.5 60.4 1.0 CD2 A:HIS79 4.0 76.5 1.0 CE1 A:HIS79 4.0 76.5 1.0 C13 A:CLA1104 4.1 60.4 1.0 C15 A:CLA1104 4.1 60.4 1.0 C3D A:CLA1104 4.1 60.4 1.0 C3B A:CLA1104 4.2 60.4 1.0 C16 A:CLA1104 4.3 60.4 1.0 C2B A:CLA1104 4.3 60.4 1.0 C2D A:CLA1104 4.3 60.4 1.0 C12 A:CLA1104 4.3 60.4 1.0 C2C A:CLA1104 4.4 60.4 1.0 C3C A:CLA1104 4.4 60.4 1.0 C3A A:CLA1104 4.5 60.4 1.0 C2A A:CLA1104 4.5 60.4 1.0 CBD A:CLA1104 4.9 60.4 1.0

Magnesium binding site 7 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1105 b:88.7 occ:1.00 MG A:CLA1105 0.0 88.7 1.0 ND A:CLA1105 2.0 88.7 1.0 NB A:CLA1105 2.0 88.7 1.0 NC A:CLA1105 2.1 88.7 1.0 NA A:CLA1105 2.2 88.7 1.0 C4D A:CLA1105 2.9 88.7 1.0 C4B A:CLA1105 3.0 88.7 1.0 C1C A:CLA1105 3.1 88.7 1.0 C1B A:CLA1105 3.1 88.7 1.0 NE2 A:HIS93 3.1 82.0 1.0 C1D A:CLA1105 3.1 88.7 1.0 C4A A:CLA1105 3.2 88.7 1.0 C4C A:CLA1105 3.2 88.7 1.0 C1A A:CLA1105 3.2 88.7 1.0 CHC A:CLA1105 3.3 88.7 1.0 CHB A:CLA1105 3.4 88.7 1.0 CHA A:CLA1105 3.5 88.7 1.0 CHD A:CLA1105 3.5 88.7 1.0 CE1 A:HIS93 3.8 82.0 1.0 CD2 A:HIS93 4.0 82.0 1.0 C36 A:BCR4019 4.1 101.7 1.0 C3D A:CLA1105 4.1 88.7 1.0 C3B A:CLA1105 4.2 88.7 1.0 C2B A:CLA1105 4.3 88.7 1.0 C2D A:CLA1105 4.3 88.7 1.0 C2C A:CLA1105 4.4 88.7 1.0 C3C A:CLA1105 4.4 88.7 1.0 C16 A:BCR4019 4.5 101.7 1.0 C3A A:CLA1105 4.5 88.7 1.0 C2A A:CLA1105 4.5 88.7 1.0 O2A A:CLA1105 4.6 88.7 1.0 ND1 A:HIS93 4.9 82.0 1.0 CBD A:CLA1105 4.9 88.7 1.0 C18 A:BCR4019 4.9 101.7 1.0

Magnesium binding site 8 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1106 b:69.0 occ:1.00 MG A:CLA1106 0.0 69.0 1.0 ND A:CLA1106 2.0 69.0 1.0 NB A:CLA1106 2.0 69.0 1.0 NC A:CLA1106 2.1 69.0 1.0 NA A:CLA1106 2.2 69.0 1.0 C4D A:CLA1106 2.9 69.0 1.0 C4B A:CLA1106 3.0 69.0 1.0 C1C A:CLA1106 3.0 69.0 1.0 C1B A:CLA1106 3.1 69.0 1.0 C1D A:CLA1106 3.1 69.0 1.0 C4A A:CLA1106 3.1 69.0 1.0 C4C A:CLA1106 3.2 69.0 1.0 C1A A:CLA1106 3.2 69.0 1.0 NE2 A:GLN115 3.2 76.5 1.0 CHC A:CLA1106 3.3 69.0 1.0 CHB A:CLA1106 3.4 69.0 1.0 CHA A:CLA1106 3.5 69.0 1.0 CHD A:CLA1106 3.5 69.0 1.0 OE1 A:GLN115 3.8 76.5 1.0 C5 A:CLA1126 3.9 58.7 1.0 CD A:GLN115 3.9 76.5 1.0 C3D A:CLA1106 4.1 69.0 1.0 C3 A:CLA1126 4.2 58.7 1.0 C3B A:CLA1106 4.2 69.0 1.0 C2B A:CLA1106 4.3 69.0 1.0 C2D A:CLA1106 4.3 69.0 1.0 C2C A:CLA1106 4.4 69.0 1.0 C3C A:CLA1106 4.4 69.0 1.0 C2 A:CLA1126 4.4 58.7 1.0 C3A A:CLA1106 4.5 69.0 1.0 C2A A:CLA1106 4.5 69.0 1.0 C4 A:CLA1126 4.9 58.7 1.0 CBD A:CLA1106 4.9 69.0 1.0

Magnesium binding site 9 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1107 b:78.8 occ:1.00 MG A:CLA1107 0.0 78.8 1.0 ND A:CLA1107 2.0 78.8 1.0 NB A:CLA1107 2.0 78.8 1.0 NC A:CLA1107 2.1 78.8 1.0 NA A:CLA1107 2.2 78.8 1.0 C4D A:CLA1107 2.9 78.8 1.0 C4B A:CLA1107 3.0 78.8 1.0 C1C A:CLA1107 3.0 78.8 1.0 OE1 A:GLN123 3.1 79.7 1.0 C1B A:CLA1107 3.1 78.8 1.0 C1D A:CLA1107 3.1 78.8 1.0 C4A A:CLA1107 3.2 78.8 1.0 C4C A:CLA1107 3.2 78.8 1.0 C1A A:CLA1107 3.2 78.8 1.0 CHC A:CLA1107 3.3 78.8 1.0 CHB A:CLA1107 3.4 78.8 1.0 CHA A:CLA1107 3.5 78.8 1.0 CHD A:CLA1107 3.5 78.8 1.0 NE2 A:GLN123 3.6 79.7 1.0 CD A:GLN123 3.6 79.7 1.0 C3D A:CLA1107 4.1 78.8 1.0 C3B A:CLA1107 4.2 78.8 1.0 C2B A:CLA1107 4.3 78.8 1.0 C2D A:CLA1107 4.3 78.8 1.0 C2C A:CLA1107 4.4 78.8 1.0 C3C A:CLA1107 4.4 78.8 1.0 C3A A:CLA1107 4.5 78.8 1.0 C2A A:CLA1107 4.5 78.8 1.0 CBB A:CLA1106 4.8 69.0 1.0 CBD A:CLA1107 4.9 78.8 1.0 C14 A:CLA1126 4.9 58.7 1.0 CG A:GLN123 5.0 79.7 1.0

Magnesium binding site 10 out of 88 in the Structure of A Minimal Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Structure of A Minimal Photosystem I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1108 b:85.3 occ:1.00 MG A:CLA1108 0.0 85.3 1.0 ND A:CLA1108 2.0 85.3 1.0 NB A:CLA1108 2.0 85.3 1.0 NC A:CLA1108 2.1 85.3 1.0 NA A:CLA1108 2.2 85.3 1.0 C4D A:CLA1108 2.9 85.3 1.0 C4B A:CLA1108 3.0 85.3 1.0 C1C A:CLA1108 3.1 85.3 1.0 C1B A:CLA1108 3.1 85.3 1.0 C1D A:CLA1108 3.1 85.3 1.0 C4A A:CLA1108 3.2 85.3 1.0 C4C A:CLA1108 3.2 85.3 1.0 C1A A:CLA1108 3.2 85.3 1.0 NE2 A:HIS179 3.2 83.9 1.0 CHC A:CLA1108 3.3 85.3 1.0 CHB A:CLA1108 3.4 85.3 1.0 CHA A:CLA1108 3.5 85.3 1.0 CHD A:CLA1108 3.5 85.3 1.0 CE1 A:HIS179 4.0 83.9 1.0 C3D A:CLA1108 4.1 85.3 1.0 CD2 A:HIS179 4.2 83.9 1.0 C3B A:CLA1108 4.2 85.3 1.0 C2B A:CLA1108 4.3 85.3 1.0 C2D A:CLA1108 4.3 85.3 1.0 C2C A:CLA1108 4.4 85.3 1.0 C3C A:CLA1108 4.4 85.3 1.0 C3A A:CLA1108 4.5 85.3 1.0 C2A A:CLA1108 4.5 85.3 1.0 CE2 A:PHE178 4.9 88.7 1.0 CBD A:CLA1108 4.9 85.3 1.0

P.Akhtar, I.Caspy, P.Nowakowski, T.Malavath, N.Nelson, H.S.Tan, P.Lambrev. Two-Dimensional Electronic Spectroscopy of A Minimal Photosystem I Complex Reveals the Rate of Primary Charge Separation Journal of the American 2021CHEMICAL Society.