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Magnesium in PDB 7oim: Mouse RNF213, with Mixed Nucleotides Bound

Enzymatic activity of Mouse RNF213, with Mixed Nucleotides Bound

All present enzymatic activity of Mouse RNF213, with Mixed Nucleotides Bound:
2.3.2.27;

Other elements in 7oim:

The structure of Mouse RNF213, with Mixed Nucleotides Bound also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mouse RNF213, with Mixed Nucleotides Bound (pdb code 7oim). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Mouse RNF213, with Mixed Nucleotides Bound, PDB code: 7oim:

Magnesium binding site 1 out of 1 in 7oim

Go back to Magnesium Binding Sites List in 7oim
Magnesium binding site 1 out of 1 in the Mouse RNF213, with Mixed Nucleotides Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mouse RNF213, with Mixed Nucleotides Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg5202

b:50.9
occ:1.00
O2G A:ATP5201 2.4 48.2 1.0
PG A:ATP5201 3.5 48.2 1.0
O1G A:ATP5201 3.5 48.2 1.0
O2B A:ATP5201 4.3 48.2 1.0
NZ A:LYS1960 4.4 36.8 1.0
O3B A:ATP5201 4.5 48.2 1.0
CE A:LYS1960 4.5 36.8 1.0
O3G A:ATP5201 4.6 48.2 1.0
OG A:SER1961 4.8 35.8 1.0
O A:ILE2020 5.0 32.6 1.0
CG A:GLU2060 5.0 29.2 1.0

Reference:

J.Ahel, A.J.Fletcher, D.Grabarczyk, E.Roitinger, L.Deszcz, A.Lehner, S.Virdee, T.Clausen. E3 Ubiquitin Ligase RNF213 Employs A Non-Canonical Zinc Finger Active Site and Is Allosterically Regulated By Atp To Be Published.
Page generated: Thu Apr 6 18:15:31 2023

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