Magnesium in PDB 7okx: Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure)

Enzymatic activity of Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure)

All present enzymatic activity of Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure):
2.7.7.6;

Other elements in 7okx:

The structure of Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure) also contains other interesting chemical elements:

Zinc (Zn) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure) (pdb code 7okx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure), PDB code: 7okx:

Magnesium binding site 1 out of 1 in 7okx

Go back to Magnesium Binding Sites List in 7okx
Magnesium binding site 1 out of 1 in the Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Active Transcription Elongation Complex Pol II-Dsif (SPT5-KOW5)-ELL2-EAF1 (Composite Structure) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2001

b:14.8
occ:1.00
OD1 A:ASP497 2.1 17.4 1.0
O3' P:A46 2.1 28.4 1.0
OD1 A:ASP495 2.1 17.3 1.0
OD1 A:ASP499 2.6 19.1 1.0
CG A:ASP495 2.9 17.3 1.0
CG A:ASP499 3.1 19.1 1.0
CG A:ASP497 3.1 17.4 1.0
OD2 A:ASP499 3.1 19.1 1.0
OD2 A:ASP495 3.2 17.3 1.0
C3' P:A46 3.3 28.4 1.0
OD2 A:ASP497 3.4 17.4 1.0
O2' P:A46 3.5 28.4 1.0
C4' P:A46 3.6 28.4 1.0
C2' P:A46 4.0 28.4 1.0
C5' P:A46 4.2 28.4 1.0
CB A:ASP495 4.3 17.3 1.0
N A:ASP495 4.3 17.3 1.0
CB A:ASP499 4.4 19.1 1.0
CB A:ASP497 4.4 17.4 1.0
N A:ASP499 4.5 19.1 1.0
N A:ASP497 4.5 17.4 1.0
C A:ASP495 4.6 17.3 1.0
O A:ASP495 4.6 17.3 1.0
CA A:ASP495 4.6 17.3 1.0
CA A:ASP499 4.8 19.1 1.0
O4' P:A46 4.8 28.4 1.0
CA A:ASP497 4.9 17.4 1.0
C A:ASP497 4.9 17.4 1.0
N A:GLY498 5.0 18.3 1.0

Reference:

Y.Chen, S.M.Vos, C.Dienemann, M.Ninov, H.Urlaub, P.Cramer. Allosteric Transcription Stimulation By Rna Polymerase II Super Elongation Complex To Be Published.
Page generated: Sat Aug 21 16:48:08 2021

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