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Magnesium in PDB 7ou4: The Structure of Muts Bound to One Molecule of Atp and One Molecule of Adp

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of Muts Bound to One Molecule of Atp and One Molecule of Adp (pdb code 7ou4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the The Structure of Muts Bound to One Molecule of Atp and One Molecule of Adp, PDB code: 7ou4:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7ou4

Go back to Magnesium Binding Sites List in 7ou4
Magnesium binding site 1 out of 2 in the The Structure of Muts Bound to One Molecule of Atp and One Molecule of Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of Muts Bound to One Molecule of Atp and One Molecule of Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1001

b:78.0
occ:1.00
OG A:SER621 2.6 32.2 1.0
O2B A:ATP1002 2.8 34.6 1.0
OD2 B:ASP661 3.1 146.2 1.0
CB A:SER621 3.3 30.3 1.0
O2G A:ATP1002 3.4 41.2 1.0
O1A A:ATP1002 3.7 34.6 1.0
OD2 A:ASP693 4.1 65.8 1.0
PB A:ATP1002 4.2 33.9 1.0
CG B:ASP661 4.3 144.5 1.0
CG2 B:THR669 4.3 67.8 1.0
PG A:ATP1002 4.5 40.7 1.0
O3B A:ATP1002 4.7 37.1 1.0
PA A:ATP1002 4.7 33.4 1.0
O3G A:ATP1002 4.7 40.8 1.0
CA A:SER621 4.7 29.3 1.0
N B:THR669 4.8 60.9 1.0
CB B:ASP661 4.8 140.8 1.0

Magnesium binding site 2 out of 2 in 7ou4

Go back to Magnesium Binding Sites List in 7ou4
Magnesium binding site 2 out of 2 in the The Structure of Muts Bound to One Molecule of Atp and One Molecule of Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of Muts Bound to One Molecule of Atp and One Molecule of Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1001

b:104.0
occ:1.00
OG B:SER621 2.6 26.2 1.0
O2B B:ADP1002 2.8 30.7 1.0
CB B:SER621 3.4 25.4 1.0
OD2 A:ASP661 4.0 126.8 1.0
OG A:SER668 4.0 55.1 1.0
O1A B:ADP1002 4.0 31.4 1.0
PB B:ADP1002 4.2 30.1 1.0
CG2 A:THR669 4.4 55.4 1.0
CG A:ASP661 4.5 125.0 1.0
O3A B:ADP1002 4.6 30.0 1.0
N A:THR669 4.6 53.5 1.0
PA B:ADP1002 4.7 30.2 1.0
CB A:ASP661 4.7 121.4 1.0
CA B:SER621 4.7 25.2 1.0
O2A B:ADP1002 4.8 31.0 1.0
O1B B:ADP1002 4.8 30.3 1.0
CB A:SER668 4.9 55.1 1.0
CA A:SER668 4.9 55.7 1.0
OG1 A:THR669 4.9 55.4 1.0

Reference:

A.Borsellini, V.Kunetsky, P.Friedhoff, M.H.Lamers. Cryogenic Electron Microscopy Structures Reveal How Atp and Dna Binding in Muts Coordinates Sequential Steps of Dna Mismatch Repair. Nat.Struct.Mol.Biol. V. 29 59 2022.
ISSN: ESSN 1545-9985
PubMed: 35013597
DOI: 10.1038/S41594-021-00707-1
Page generated: Thu Oct 3 03:35:16 2024

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