Magnesium in PDB 7oui: Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Enzymatic activity of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
All present enzymatic activity of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted):
1.10.3.9;
Other elements in 7oui:
The structure of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
200;
Page 21, Binding sites: 201 -
210;
Page 22, Binding sites: 211 -
220;
Page 23, Binding sites: 221 -
222;
Binding sites:
The binding sites of Magnesium atom in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
(pdb code 7oui). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 222 binding sites of Magnesium where determined in the
Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted), PDB code: 7oui:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 1 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg301
b:105.6
occ:1.00
|
MG
|
1:CHL301
|
0.0
|
105.6
|
1.0
|
O
|
1:VAL153
|
1.9
|
105.7
|
1.0
|
ND
|
1:CHL301
|
2.0
|
105.6
|
1.0
|
NB
|
1:CHL301
|
2.1
|
105.6
|
1.0
|
NC
|
1:CHL301
|
2.1
|
105.6
|
1.0
|
NA
|
1:CHL301
|
2.1
|
105.6
|
1.0
|
C4D
|
1:CHL301
|
3.0
|
105.6
|
1.0
|
C
|
1:VAL153
|
3.0
|
105.7
|
1.0
|
C1B
|
1:CHL301
|
3.1
|
105.6
|
1.0
|
C4A
|
1:CHL301
|
3.1
|
105.6
|
1.0
|
C1D
|
1:CHL301
|
3.1
|
105.6
|
1.0
|
C4C
|
1:CHL301
|
3.1
|
105.6
|
1.0
|
C1C
|
1:CHL301
|
3.1
|
105.6
|
1.0
|
C4B
|
1:CHL301
|
3.1
|
105.6
|
1.0
|
C1A
|
1:CHL301
|
3.2
|
105.6
|
1.0
|
CHB
|
1:CHL301
|
3.4
|
105.6
|
1.0
|
CHA
|
1:CHL301
|
3.5
|
105.6
|
1.0
|
CHD
|
1:CHL301
|
3.5
|
105.6
|
1.0
|
CHC
|
1:CHL301
|
3.5
|
105.6
|
1.0
|
CA
|
1:VAL153
|
3.6
|
105.7
|
1.0
|
O
|
1:HIS154
|
3.9
|
99.1
|
1.0
|
N
|
1:HIS154
|
4.1
|
99.1
|
1.0
|
O
|
1:LEU152
|
4.1
|
99.8
|
1.0
|
C
|
1:HIS154
|
4.2
|
99.1
|
1.0
|
C3D
|
1:CHL301
|
4.2
|
105.6
|
1.0
|
C2D
|
1:CHL301
|
4.3
|
105.6
|
1.0
|
C2B
|
1:CHL301
|
4.3
|
105.6
|
1.0
|
C3C
|
1:CHL301
|
4.3
|
105.6
|
1.0
|
CG1
|
1:VAL153
|
4.3
|
105.7
|
1.0
|
C2C
|
1:CHL301
|
4.4
|
105.6
|
1.0
|
C3A
|
1:CHL301
|
4.4
|
105.6
|
1.0
|
C3B
|
1:CHL301
|
4.4
|
105.6
|
1.0
|
C2A
|
1:CHL301
|
4.4
|
105.6
|
1.0
|
CA
|
1:HIS154
|
4.5
|
99.1
|
1.0
|
CB
|
1:HIS154
|
4.5
|
99.1
|
1.0
|
CB
|
1:VAL153
|
4.6
|
105.7
|
1.0
|
N
|
1:VAL153
|
4.7
|
105.7
|
1.0
|
N
|
1:ALA155
|
4.8
|
93.8
|
1.0
|
C
|
1:LEU152
|
4.8
|
99.8
|
1.0
|
CBD
|
1:CHL301
|
5.0
|
105.6
|
1.0
|
|
Magnesium binding site 2 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 2 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg302
b:115.8
occ:1.00
|
MG
|
1:CHL302
|
0.0
|
115.8
|
1.0
|
ND
|
1:CHL302
|
2.0
|
115.8
|
1.0
|
NB
|
1:CHL302
|
2.1
|
115.8
|
1.0
|
NA
|
1:CHL302
|
2.1
|
115.8
|
1.0
|
NC
|
1:CHL302
|
2.1
|
115.8
|
1.0
|
NE2
|
1:GLN165
|
2.3
|
95.7
|
1.0
|
C4D
|
1:CHL302
|
3.0
|
115.8
|
1.0
|
C4A
|
1:CHL302
|
3.1
|
115.8
|
1.0
|
C1B
|
1:CHL302
|
3.1
|
115.8
|
1.0
|
CD
|
1:GLN165
|
3.1
|
95.7
|
1.0
|
C1D
|
1:CHL302
|
3.1
|
115.8
|
1.0
|
C4C
|
1:CHL302
|
3.2
|
115.8
|
1.0
|
C4B
|
1:CHL302
|
3.2
|
115.8
|
1.0
|
C1A
|
1:CHL302
|
3.2
|
115.8
|
1.0
|
C1C
|
1:CHL302
|
3.2
|
115.8
|
1.0
|
CHB
|
1:CHL302
|
3.4
|
115.8
|
1.0
|
CHA
|
1:CHL302
|
3.5
|
115.8
|
1.0
|
CHC
|
1:CHL302
|
3.5
|
115.8
|
1.0
|
CHD
|
1:CHL302
|
3.5
|
115.8
|
1.0
|
OE1
|
1:GLN165
|
3.6
|
95.7
|
1.0
|
CG
|
1:GLN165
|
4.1
|
95.7
|
1.0
|
C3D
|
1:CHL302
|
4.3
|
115.8
|
1.0
|
C2B
|
1:CHL302
|
4.3
|
115.8
|
1.0
|
C3A
|
1:CHL302
|
4.4
|
115.8
|
1.0
|
C2D
|
1:CHL302
|
4.4
|
115.8
|
1.0
|
C3C
|
1:CHL302
|
4.4
|
115.8
|
1.0
|
C3B
|
1:CHL302
|
4.4
|
115.8
|
1.0
|
C2C
|
1:CHL302
|
4.4
|
115.8
|
1.0
|
C2A
|
1:CHL302
|
4.4
|
115.8
|
1.0
|
CMA
|
1:CHL302
|
4.9
|
115.8
|
1.0
|
CBD
|
1:CHL302
|
5.0
|
115.8
|
1.0
|
|
Magnesium binding site 3 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 3 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg601
b:124.8
occ:1.00
|
MG
|
2:CHL601
|
0.0
|
124.8
|
1.0
|
ND
|
2:CHL601
|
2.0
|
124.8
|
1.0
|
O
|
2:TYR58
|
2.1
|
118.5
|
1.0
|
NB
|
2:CHL601
|
2.1
|
124.8
|
1.0
|
NC
|
2:CHL601
|
2.1
|
124.8
|
1.0
|
NA
|
2:CHL601
|
2.1
|
124.8
|
1.0
|
C4D
|
2:CHL601
|
3.0
|
124.8
|
1.0
|
C1B
|
2:CHL601
|
3.1
|
124.8
|
1.0
|
C4A
|
2:CHL601
|
3.1
|
124.8
|
1.0
|
C1D
|
2:CHL601
|
3.1
|
124.8
|
1.0
|
C4C
|
2:CHL601
|
3.1
|
124.8
|
1.0
|
C1C
|
2:CHL601
|
3.1
|
124.8
|
1.0
|
C4B
|
2:CHL601
|
3.1
|
124.8
|
1.0
|
C1A
|
2:CHL601
|
3.2
|
124.8
|
1.0
|
C
|
2:TYR58
|
3.2
|
118.5
|
1.0
|
CHB
|
2:CHL601
|
3.4
|
124.8
|
1.0
|
CHD
|
2:CHL601
|
3.4
|
124.8
|
1.0
|
CHA
|
2:CHL601
|
3.5
|
124.8
|
1.0
|
CHC
|
2:CHL601
|
3.5
|
124.8
|
1.0
|
CA
|
2:LEU59
|
4.0
|
105.5
|
1.0
|
N
|
2:LEU59
|
4.0
|
105.5
|
1.0
|
C3D
|
2:CHL601
|
4.2
|
124.8
|
1.0
|
CA
|
2:TYR58
|
4.3
|
118.5
|
1.0
|
C2D
|
2:CHL601
|
4.3
|
124.8
|
1.0
|
C2B
|
2:CHL601
|
4.3
|
124.8
|
1.0
|
C3C
|
2:CHL601
|
4.3
|
124.8
|
1.0
|
C3A
|
2:CHL601
|
4.3
|
124.8
|
1.0
|
C2C
|
2:CHL601
|
4.3
|
124.8
|
1.0
|
C3B
|
2:CHL601
|
4.4
|
124.8
|
1.0
|
C2A
|
2:CHL601
|
4.4
|
124.8
|
1.0
|
C10
|
2:LHG606
|
4.5
|
133.0
|
1.0
|
C
|
2:LEU59
|
4.5
|
105.5
|
1.0
|
CG
|
2:TYR58
|
4.7
|
118.5
|
1.0
|
N
|
2:GLY60
|
4.7
|
97.1
|
1.0
|
CMA
|
2:CHL601
|
4.8
|
124.8
|
1.0
|
CD1
|
2:TYR58
|
4.8
|
118.5
|
1.0
|
CD2
|
2:TYR58
|
4.9
|
118.5
|
1.0
|
CBD
|
2:CHL601
|
5.0
|
124.8
|
1.0
|
|
Magnesium binding site 4 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 4 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg602
b:110.7
occ:1.00
|
MG
|
2:CLA602
|
0.0
|
110.7
|
1.0
|
NA
|
2:CLA602
|
1.9
|
110.7
|
1.0
|
NB
|
2:CLA602
|
1.9
|
110.7
|
1.0
|
NC
|
2:CLA602
|
1.9
|
110.7
|
1.0
|
ND
|
2:CLA602
|
1.9
|
110.7
|
1.0
|
OE2
|
2:GLU99
|
2.1
|
99.2
|
1.0
|
C4D
|
2:CLA602
|
2.9
|
110.7
|
1.0
|
C1C
|
2:CLA602
|
2.9
|
110.7
|
1.0
|
C1A
|
2:CLA602
|
2.9
|
110.7
|
1.0
|
C4B
|
2:CLA602
|
2.9
|
110.7
|
1.0
|
C4A
|
2:CLA602
|
2.9
|
110.7
|
1.0
|
C4C
|
2:CLA602
|
3.0
|
110.7
|
1.0
|
C1B
|
2:CLA602
|
3.0
|
110.7
|
1.0
|
C1D
|
2:CLA602
|
3.0
|
110.7
|
1.0
|
CHC
|
2:CLA602
|
3.1
|
110.7
|
1.0
|
CD
|
2:GLU99
|
3.2
|
99.2
|
1.0
|
CHB
|
2:CLA602
|
3.2
|
110.7
|
1.0
|
CHA
|
2:CLA602
|
3.3
|
110.7
|
1.0
|
CHD
|
2:CLA602
|
3.4
|
110.7
|
1.0
|
OE1
|
2:GLU99
|
3.9
|
99.2
|
1.0
|
CZ3
|
2:TRP80
|
4.1
|
114.2
|
1.0
|
C2C
|
2:CLA602
|
4.1
|
110.7
|
1.0
|
C3D
|
2:CLA602
|
4.1
|
110.7
|
1.0
|
C3B
|
2:CLA602
|
4.1
|
110.7
|
1.0
|
C3A
|
2:CLA602
|
4.1
|
110.7
|
1.0
|
C2B
|
2:CLA602
|
4.1
|
110.7
|
1.0
|
C3C
|
2:CLA602
|
4.1
|
110.7
|
1.0
|
C2D
|
2:CLA602
|
4.1
|
110.7
|
1.0
|
C2A
|
2:CLA602
|
4.2
|
110.7
|
1.0
|
CE3
|
2:TRP80
|
4.2
|
114.2
|
1.0
|
CG
|
2:GLU99
|
4.3
|
99.2
|
1.0
|
CMA
|
2:CLA602
|
4.5
|
110.7
|
1.0
|
CBD
|
2:CLA602
|
4.7
|
110.7
|
1.0
|
CH2
|
2:TRP80
|
4.9
|
114.2
|
1.0
|
|
Magnesium binding site 5 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 5 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg603
b:95.9
occ:1.00
|
MG
|
2:CHL603
|
0.0
|
95.9
|
1.0
|
ND
|
2:CHL603
|
2.0
|
95.9
|
1.0
|
NC
|
2:CHL603
|
2.1
|
95.9
|
1.0
|
NB
|
2:CHL603
|
2.1
|
95.9
|
1.0
|
NA
|
2:CHL603
|
2.1
|
95.9
|
1.0
|
C4D
|
2:CHL603
|
3.0
|
95.9
|
1.0
|
C1C
|
2:CHL603
|
3.1
|
95.9
|
1.0
|
C1B
|
2:CHL603
|
3.1
|
95.9
|
1.0
|
C4A
|
2:CHL603
|
3.1
|
95.9
|
1.0
|
C1A
|
2:CHL603
|
3.1
|
95.9
|
1.0
|
C1D
|
2:CHL603
|
3.1
|
95.9
|
1.0
|
C4C
|
2:CHL603
|
3.1
|
95.9
|
1.0
|
C4B
|
2:CHL603
|
3.1
|
95.9
|
1.0
|
CZ
|
2:PHE176
|
3.3
|
92.3
|
1.0
|
CE2
|
2:PHE176
|
3.3
|
92.3
|
1.0
|
CHA
|
2:CHL603
|
3.4
|
95.9
|
1.0
|
CHB
|
2:CHL603
|
3.5
|
95.9
|
1.0
|
CHC
|
2:CHL603
|
3.5
|
95.9
|
1.0
|
CHD
|
2:CHL603
|
3.5
|
95.9
|
1.0
|
CE1
|
2:PHE176
|
3.9
|
92.3
|
1.0
|
CD2
|
2:PHE176
|
3.9
|
92.3
|
1.0
|
C3D
|
2:CHL603
|
4.3
|
95.9
|
1.0
|
CE1
|
2:TYR196
|
4.3
|
90.2
|
1.0
|
C2C
|
2:CHL603
|
4.3
|
95.9
|
1.0
|
C3C
|
2:CHL603
|
4.3
|
95.9
|
1.0
|
C2D
|
2:CHL603
|
4.3
|
95.9
|
1.0
|
C2B
|
2:CHL603
|
4.4
|
95.9
|
1.0
|
CD1
|
2:PHE176
|
4.4
|
92.3
|
1.0
|
C3A
|
2:CHL603
|
4.4
|
95.9
|
1.0
|
C3B
|
2:CHL603
|
4.4
|
95.9
|
1.0
|
C2A
|
2:CHL603
|
4.4
|
95.9
|
1.0
|
CG
|
2:PHE176
|
4.4
|
92.3
|
1.0
|
CD1
|
2:TYR196
|
4.5
|
90.2
|
1.0
|
CBD
|
2:CHL603
|
4.9
|
95.9
|
1.0
|
CBA
|
2:CHL603
|
4.9
|
95.9
|
1.0
|
|
Magnesium binding site 6 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 6 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg604
b:129.9
occ:1.00
|
MG
|
2:CLA604
|
0.0
|
129.9
|
1.0
|
ND
|
2:CLA604
|
1.9
|
129.9
|
1.0
|
NB
|
2:CLA604
|
1.9
|
129.9
|
1.0
|
NC
|
2:CLA604
|
1.9
|
129.9
|
1.0
|
NA
|
2:CLA604
|
2.0
|
129.9
|
1.0
|
C4D
|
2:CLA604
|
2.9
|
129.9
|
1.0
|
C1C
|
2:CLA604
|
2.9
|
129.9
|
1.0
|
C1A
|
2:CLA604
|
2.9
|
129.9
|
1.0
|
C4A
|
2:CLA604
|
2.9
|
129.9
|
1.0
|
C4B
|
2:CLA604
|
2.9
|
129.9
|
1.0
|
O6
|
2:LHG606
|
2.9
|
133.0
|
1.0
|
C4C
|
2:CLA604
|
3.0
|
129.9
|
1.0
|
C1B
|
2:CLA604
|
3.0
|
129.9
|
1.0
|
C1D
|
2:CLA604
|
3.1
|
129.9
|
1.0
|
CHC
|
2:CLA604
|
3.1
|
129.9
|
1.0
|
CHA
|
2:CLA604
|
3.3
|
129.9
|
1.0
|
CHB
|
2:CLA604
|
3.3
|
129.9
|
1.0
|
CHD
|
2:CLA604
|
3.4
|
129.9
|
1.0
|
C6
|
2:LHG606
|
3.6
|
133.0
|
1.0
|
C5
|
2:LHG606
|
3.7
|
133.0
|
1.0
|
C4
|
2:LHG606
|
3.7
|
133.0
|
1.0
|
C3D
|
2:CLA604
|
4.1
|
129.9
|
1.0
|
C2C
|
2:CLA604
|
4.1
|
129.9
|
1.0
|
C3B
|
2:CLA604
|
4.1
|
129.9
|
1.0
|
C2B
|
2:CLA604
|
4.1
|
129.9
|
1.0
|
C2D
|
2:CLA604
|
4.2
|
129.9
|
1.0
|
C3C
|
2:CLA604
|
4.2
|
129.9
|
1.0
|
P
|
2:LHG606
|
4.2
|
133.0
|
1.0
|
C3A
|
2:CLA604
|
4.2
|
129.9
|
1.0
|
C2A
|
2:CLA604
|
4.3
|
129.9
|
1.0
|
O4
|
2:LHG606
|
4.3
|
133.0
|
1.0
|
CBD
|
2:CLA604
|
4.7
|
129.9
|
1.0
|
O3
|
2:LHG606
|
4.8
|
133.0
|
1.0
|
CBA
|
2:CLA604
|
4.8
|
129.9
|
1.0
|
CMA
|
2:CLA604
|
4.9
|
129.9
|
1.0
|
|
Magnesium binding site 7 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 7 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg605
b:139.5
occ:1.00
|
MG
|
2:CLA605
|
0.0
|
139.5
|
1.0
|
ND
|
2:CLA605
|
2.0
|
139.5
|
1.0
|
NB
|
2:CLA605
|
2.0
|
139.5
|
1.0
|
NA
|
2:CLA605
|
2.0
|
139.5
|
1.0
|
NC
|
2:CLA605
|
2.0
|
139.5
|
1.0
|
C4D
|
2:CLA605
|
2.9
|
139.5
|
1.0
|
C4A
|
2:CLA605
|
2.9
|
139.5
|
1.0
|
C1A
|
2:CLA605
|
3.0
|
139.5
|
1.0
|
C1C
|
2:CLA605
|
3.0
|
139.5
|
1.0
|
C1B
|
2:CLA605
|
3.0
|
139.5
|
1.0
|
C4C
|
2:CLA605
|
3.0
|
139.5
|
1.0
|
C4B
|
2:CLA605
|
3.0
|
139.5
|
1.0
|
C1D
|
2:CLA605
|
3.1
|
139.5
|
1.0
|
CHB
|
2:CLA605
|
3.3
|
139.5
|
1.0
|
CHC
|
2:CLA605
|
3.3
|
139.5
|
1.0
|
CHA
|
2:CLA605
|
3.4
|
139.5
|
1.0
|
CHD
|
2:CLA605
|
3.4
|
139.5
|
1.0
|
C3D
|
2:CLA605
|
4.2
|
139.5
|
1.0
|
C2B
|
2:CLA605
|
4.2
|
139.5
|
1.0
|
C2C
|
2:CLA605
|
4.2
|
139.5
|
1.0
|
C2D
|
2:CLA605
|
4.2
|
139.5
|
1.0
|
C3B
|
2:CLA605
|
4.2
|
139.5
|
1.0
|
C3C
|
2:CLA605
|
4.2
|
139.5
|
1.0
|
C3A
|
2:CLA605
|
4.3
|
139.5
|
1.0
|
C2A
|
2:CLA605
|
4.3
|
139.5
|
1.0
|
CBD
|
2:CLA605
|
4.8
|
139.5
|
1.0
|
|
Magnesium binding site 8 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 8 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg401
b:46.0
occ:1.00
|
MG
|
A:CLA401
|
0.0
|
46.0
|
1.0
|
NE2
|
A:HIS198
|
1.9
|
28.0
|
1.0
|
ND
|
A:CLA401
|
2.0
|
46.0
|
1.0
|
NB
|
A:CLA401
|
2.0
|
46.0
|
1.0
|
NA
|
A:CLA401
|
2.0
|
46.0
|
1.0
|
NC
|
A:CLA401
|
2.0
|
46.0
|
1.0
|
CE1
|
A:HIS198
|
2.7
|
28.0
|
1.0
|
C4A
|
A:CLA401
|
2.9
|
46.0
|
1.0
|
C4D
|
A:CLA401
|
3.0
|
46.0
|
1.0
|
C1B
|
A:CLA401
|
3.0
|
46.0
|
1.0
|
C4C
|
A:CLA401
|
3.0
|
46.0
|
1.0
|
C1C
|
A:CLA401
|
3.0
|
46.0
|
1.0
|
C1A
|
A:CLA401
|
3.0
|
46.0
|
1.0
|
CD2
|
A:HIS198
|
3.0
|
28.0
|
1.0
|
C4B
|
A:CLA401
|
3.1
|
46.0
|
1.0
|
C1D
|
A:CLA401
|
3.1
|
46.0
|
1.0
|
CHB
|
A:CLA401
|
3.2
|
46.0
|
1.0
|
CHD
|
A:CLA401
|
3.3
|
46.0
|
1.0
|
CHC
|
A:CLA401
|
3.4
|
46.0
|
1.0
|
CHA
|
A:CLA401
|
3.4
|
46.0
|
1.0
|
ND1
|
A:HIS198
|
3.9
|
28.0
|
1.0
|
CG
|
A:HIS198
|
4.1
|
28.0
|
1.0
|
C2B
|
A:CLA401
|
4.2
|
46.0
|
1.0
|
C3D
|
A:CLA401
|
4.2
|
46.0
|
1.0
|
C2D
|
A:CLA401
|
4.2
|
46.0
|
1.0
|
C3C
|
A:CLA401
|
4.2
|
46.0
|
1.0
|
C2C
|
A:CLA401
|
4.2
|
46.0
|
1.0
|
C3B
|
A:CLA401
|
4.2
|
46.0
|
1.0
|
CE
|
A:MET183
|
4.2
|
31.9
|
1.0
|
C3A
|
A:CLA401
|
4.2
|
46.0
|
1.0
|
C2A
|
A:CLA401
|
4.3
|
46.0
|
1.0
|
CG2
|
A:VAL202
|
4.7
|
32.1
|
1.0
|
CBD
|
A:CLA401
|
4.9
|
46.0
|
1.0
|
CAB
|
D:CLA402
|
4.9
|
46.0
|
1.0
|
CD1
|
A:ILE192
|
5.0
|
32.7
|
1.0
|
|
Magnesium binding site 9 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 9 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg402
b:46.0
occ:1.00
|
MG
|
A:CLA402
|
0.0
|
46.0
|
1.0
|
NB
|
A:CLA402
|
2.0
|
46.0
|
1.0
|
ND
|
A:CLA402
|
2.0
|
46.0
|
1.0
|
NA
|
A:CLA402
|
2.0
|
46.0
|
1.0
|
NC
|
A:CLA402
|
2.0
|
46.0
|
1.0
|
C4A
|
A:CLA402
|
2.9
|
46.0
|
1.0
|
C4D
|
A:CLA402
|
2.9
|
46.0
|
1.0
|
C1B
|
A:CLA402
|
3.0
|
46.0
|
1.0
|
C4C
|
A:CLA402
|
3.0
|
46.0
|
1.0
|
C1A
|
A:CLA402
|
3.0
|
46.0
|
1.0
|
C1C
|
A:CLA402
|
3.0
|
46.0
|
1.0
|
C4B
|
A:CLA402
|
3.1
|
46.0
|
1.0
|
C1D
|
A:CLA402
|
3.1
|
46.0
|
1.0
|
CHB
|
A:CLA402
|
3.2
|
46.0
|
1.0
|
CHD
|
A:CLA402
|
3.4
|
46.0
|
1.0
|
CHA
|
A:CLA402
|
3.4
|
46.0
|
1.0
|
CHC
|
A:CLA402
|
3.4
|
46.0
|
1.0
|
C2B
|
A:CLA402
|
4.2
|
46.0
|
1.0
|
C3D
|
A:CLA402
|
4.2
|
46.0
|
1.0
|
C2D
|
A:CLA402
|
4.2
|
46.0
|
1.0
|
C3C
|
A:CLA402
|
4.2
|
46.0
|
1.0
|
C2C
|
A:CLA402
|
4.2
|
46.0
|
1.0
|
C3B
|
A:CLA402
|
4.2
|
46.0
|
1.0
|
C3A
|
A:CLA402
|
4.3
|
46.0
|
1.0
|
CBB
|
A:PHO403
|
4.3
|
46.0
|
1.0
|
C2A
|
A:CLA402
|
4.3
|
46.0
|
1.0
|
CG2
|
A:THR179
|
4.4
|
26.0
|
1.0
|
OG1
|
A:THR179
|
4.4
|
26.0
|
1.0
|
C19
|
A:PHO403
|
4.6
|
46.0
|
1.0
|
CB
|
A:THR179
|
4.8
|
26.0
|
1.0
|
CBA
|
A:CLA402
|
4.8
|
46.0
|
1.0
|
CBD
|
A:CLA402
|
4.8
|
46.0
|
1.0
|
|
Magnesium binding site 10 out
of 222 in 7oui
Go back to
Magnesium Binding Sites List in 7oui
Magnesium binding site 10 out
of 222 in the Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted)
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of C2S2M2-Type Photosystem Supercomplex From Arabidopsis Thaliana (Digitonin-Extracted) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg405
b:46.0
occ:1.00
|
MG
|
A:CLA405
|
0.0
|
46.0
|
1.0
|
CE1
|
A:HIS118
|
1.9
|
26.4
|
1.0
|
NE2
|
A:HIS118
|
1.9
|
26.4
|
1.0
|
ND
|
A:CLA405
|
2.0
|
46.0
|
1.0
|
NB
|
A:CLA405
|
2.0
|
46.0
|
1.0
|
NA
|
A:CLA405
|
2.0
|
46.0
|
1.0
|
NC
|
A:CLA405
|
2.0
|
46.0
|
1.0
|
C4A
|
A:CLA405
|
2.9
|
46.0
|
1.0
|
C4D
|
A:CLA405
|
3.0
|
46.0
|
1.0
|
C1B
|
A:CLA405
|
3.0
|
46.0
|
1.0
|
C4C
|
A:CLA405
|
3.0
|
46.0
|
1.0
|
C1A
|
A:CLA405
|
3.0
|
46.0
|
1.0
|
C1C
|
A:CLA405
|
3.0
|
46.0
|
1.0
|
C4B
|
A:CLA405
|
3.1
|
46.0
|
1.0
|
C1D
|
A:CLA405
|
3.1
|
46.0
|
1.0
|
CHB
|
A:CLA405
|
3.2
|
46.0
|
1.0
|
ND1
|
A:HIS118
|
3.2
|
26.4
|
1.0
|
CD2
|
A:HIS118
|
3.3
|
26.4
|
1.0
|
CHD
|
A:CLA405
|
3.4
|
46.0
|
1.0
|
CHC
|
A:CLA405
|
3.4
|
46.0
|
1.0
|
CHA
|
A:CLA405
|
3.4
|
46.0
|
1.0
|
CG
|
A:HIS118
|
3.9
|
26.4
|
1.0
|
C2B
|
A:CLA405
|
4.2
|
46.0
|
1.0
|
C3D
|
A:CLA405
|
4.2
|
46.0
|
1.0
|
C2D
|
A:CLA405
|
4.2
|
46.0
|
1.0
|
C3C
|
A:CLA405
|
4.2
|
46.0
|
1.0
|
C2C
|
A:CLA405
|
4.2
|
46.0
|
1.0
|
C3B
|
A:CLA405
|
4.2
|
46.0
|
1.0
|
C3A
|
A:CLA405
|
4.3
|
46.0
|
1.0
|
C2A
|
A:CLA405
|
4.3
|
46.0
|
1.0
|
CG2
|
I:VAL12
|
4.5
|
27.9
|
1.0
|
CG2
|
A:THR43
|
4.7
|
25.5
|
1.0
|
CG1
|
I:VAL8
|
4.8
|
36.8
|
1.0
|
CBD
|
A:CLA405
|
4.9
|
46.0
|
1.0
|
|
Reference:
A.T.Graca,
M.Hall,
K.Persson,
W.P.Schroder.
High-Resolution Model of Arabidopsis Photosystem II Reveals the Structural Consequences of Digitonin-Extraction. Sci Rep V. 11 15534 2021.
ISSN: ESSN 2045-2322
PubMed: 34330992
DOI: 10.1038/S41598-021-94914-X
Page generated: Thu Oct 3 03:36:10 2024
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