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Magnesium in PDB 7plt: Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 1ER)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 1ER) (pdb code 7plt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 1ER), PDB code: 7plt:

Magnesium binding site 1 out of 1 in 7plt

Go back to Magnesium Binding Sites List in 7plt
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 1ER)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 1ER) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:45.4
occ:1.00
O2B C:ADP401 2.1 54.4 1.0
PB C:ADP401 3.2 54.4 1.0
NE2 C:GLN137 3.4 49.2 1.0
O3B C:ADP401 3.4 54.4 1.0
O2A C:ADP401 4.0 54.4 1.0
OD2 C:ASP11 4.1 54.0 1.0
CD C:GLN137 4.2 49.2 1.0
O3A C:ADP401 4.2 54.4 1.0
O1B C:ADP401 4.3 54.4 1.0
OE1 C:GLN137 4.5 49.2 1.0
CA C:GLY13 4.5 58.9 1.0
CA C:GLY156 4.6 52.0 1.0
OD1 C:ASP154 4.6 47.9 1.0
PA C:ADP401 4.6 54.4 1.0
CG2 C:VAL339 4.6 41.8 1.0
NZ C:LYS18 4.7 48.6 1.0
OD1 C:ASP11 4.8 54.0 1.0
CG C:ASP11 4.9 54.0 1.0
CB C:VAL339 5.0 41.8 1.0

Reference:

S.Pospich, H.L.Sweeney, A.Houdusse, S.Raunser. High-Resolution Structures of the Actomyosin-V Complex in Three Nucleotide States Provide Insights Into the Force Generation Mechanism. Elife V. 10 2021.
ISSN: ESSN 2050-084X
PubMed: 34812732
DOI: 10.7554/ELIFE.73724
Page generated: Thu Oct 3 04:12:02 2024

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