Magnesium in PDB 7q8s: Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin

The binding sites of Magnesium atom in the Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin (pdb code 7q8s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin, PDB code: 7q8s:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:19.8 occ:1.00 O2B A:ADP600 2.6 19.2 1.0 PB A:ADP600 4.1 19.2 1.0 OE1 A:GLN137 4.2 23.2 1.0 OD1 A:ASP154 4.3 20.6 1.0 CA A:GLY13 4.3 24.5 1.0 O2A A:ADP600 4.3 19.2 1.0 OD2 A:ASP11 4.4 20.1 1.0 OD1 A:ASP11 4.8 20.1 1.0 O3A A:ADP600 4.8 19.2 1.0 NZ A:LYS18 4.8 18.0 1.0 CD A:GLN137 4.8 23.2 1.0 OD2 A:ASP154 4.8 20.6 1.0 O1B A:ADP600 4.9 19.2 1.0 CG A:ASP154 5.0 20.6 1.0

Magnesium binding site 2 out of 5 in the Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:16.9 occ:1.00 O2B C:ADP600 2.6 21.9 1.0 PB C:ADP600 4.1 21.9 1.0 OE1 C:GLN137 4.2 23.0 1.0 OD1 C:ASP154 4.3 20.2 1.0 CA C:GLY13 4.3 27.4 1.0 O2A C:ADP600 4.3 21.9 1.0 OD2 C:ASP11 4.4 23.8 1.0 OD1 C:ASP11 4.8 23.8 1.0 O3A C:ADP600 4.8 21.9 1.0 NZ C:LYS18 4.8 19.6 1.0 CD C:GLN137 4.8 23.0 1.0 OD2 C:ASP154 4.8 20.2 1.0 O1B C:ADP600 4.9 21.9 1.0 CG C:ASP154 5.0 20.2 1.0

Magnesium binding site 3 out of 5 in the Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg601 b:16.5 occ:1.00 O2B D:ADP600 2.6 19.0 1.0 PB D:ADP600 4.1 19.0 1.0 OE1 D:GLN137 4.2 21.0 1.0 OD1 D:ASP154 4.3 18.9 1.0 CA D:GLY13 4.3 24.9 1.0 O2A D:ADP600 4.3 19.0 1.0 OD2 D:ASP11 4.4 22.3 1.0 OD1 D:ASP11 4.8 22.3 1.0 O3A D:ADP600 4.8 19.0 1.0 NZ D:LYS18 4.8 17.4 1.0 CD D:GLN137 4.8 21.0 1.0 OD2 D:ASP154 4.8 18.9 1.0 O1B D:ADP600 4.9 19.0 1.0 CG D:ASP154 5.0 18.9 1.0

Magnesium binding site 4 out of 5 in the Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg601 b:23.3 occ:1.00 O2B E:ADP600 2.6 36.6 1.0 PB E:ADP600 4.1 36.6 1.0 OE1 E:GLN137 4.2 23.2 1.0 OD1 E:ASP154 4.3 20.8 1.0 CA E:GLY13 4.3 27.2 1.0 O2A E:ADP600 4.3 36.6 1.0 OD2 E:ASP11 4.4 23.0 1.0 OD1 E:ASP11 4.8 23.0 1.0 O3A E:ADP600 4.8 36.6 1.0 NZ E:LYS18 4.8 18.1 1.0 CD E:GLN137 4.8 23.2 1.0 OD2 E:ASP154 4.8 20.8 1.0 O1B E:ADP600 4.9 36.6 1.0 CG E:ASP154 5.0 20.8 1.0

Magnesium binding site 5 out of 5 in the Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Leishmania Major Adp-Actin Filament Decorated with Leishmania Major Cofilin within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg601 b:23.0 occ:1.00 O2B F:ADP600 2.6 36.6 1.0 PB F:ADP600 4.1 36.6 1.0 OE1 F:GLN137 4.2 25.0 1.0 OD1 F:ASP154 4.3 25.3 1.0 CA F:GLY13 4.3 28.6 1.0 O2A F:ADP600 4.3 36.6 1.0 OD2 F:ASP11 4.4 25.3 1.0 OD1 F:ASP11 4.8 25.3 1.0 O3A F:ADP600 4.8 36.6 1.0 NZ F:LYS18 4.8 19.3 1.0 CD F:GLN137 4.8 25.0 1.0 OD2 F:ASP154 4.8 25.3 1.0 O1B F:ADP600 4.9 36.6 1.0 CG F:ASP154 5.0 25.3 1.0

T.Kotila, H.Wioland, M.Selvaraj, K.Kogan, L.Antenucci, A.Jegou, J.T.Huiskonen, G.Romet-Lemonne, P.Lappalainen. Structural Basis of Rapid Actin Dynamics in the Evolutionarily Divergent Leishmania Parasite. Nat Commun V. 13 3442 2022.
ISSN: ESSN 2041-1723
PubMed: 35705539
DOI: 10.1038/S41467-022-31068-Y