Magnesium in PDB 7qou: A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability

Enzymatic activity of A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability

All present enzymatic activity of A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability:
4.2.1.84;

Protein crystallography data

The structure of A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability, PDB code: 7qou was solved by J.C.Van Wyk, D.A.Cowan, M.J.Danson, T.L.Tsekoa, M.F.Sayed, B.T.Sewell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 74.95 / 1.30
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 106.084, 106.084, 82.975, 90, 90, 90
R / Rfree (%) 15.3 / 18.2

Other elements in 7qou:

The structure of A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Cobalt (Co) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability (pdb code 7qou). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability, PDB code: 7qou:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7qou

Go back to Magnesium Binding Sites List in 7qou
Magnesium binding site 1 out of 2 in the A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:17.0
occ:1.00
OD1 B:ASP218 2.8 12.1 1.0
O A:ILE173 2.8 9.7 1.0
N A:SER171 2.9 9.3 1.0
OG A:SER171 3.2 9.9 1.0
CA A:SER169 3.2 9.8 1.0
C A:SER169 3.2 9.8 1.0
N A:SER170 3.2 9.2 1.0
O A:SER171 3.3 10.3 1.0
CA A:SER171 3.6 8.4 1.0
CG B:ASP218 3.6 11.4 1.0
C A:SER171 3.6 9.5 1.0
C A:ILE173 3.7 9.8 1.0
CE1 A:PHE175 3.8 11.4 1.0
CB A:SER171 3.8 9.7 1.0
O A:SER169 3.9 11.8 1.0
N A:ILE173 3.9 9.4 1.0
CB A:ILE173 3.9 9.7 1.0
C A:SER170 3.9 8.7 1.0
O A:ASP168 4.0 9.9 1.0
CB A:SER169 4.0 10.5 1.0
CA A:ILE173 4.1 10.0 1.0
CB B:ASP218 4.1 9.3 1.0
CA A:SER170 4.1 8.6 1.0
NH1 A:ARG174 4.2 11.7 1.0
N A:SER169 4.3 8.4 1.0
CZ A:PHE175 4.4 11.6 1.0
OG A:SER170 4.5 10.2 1.0
N A:GLU172 4.5 9.4 1.0
OD2 B:ASP218 4.5 10.1 1.0
C A:ASP168 4.6 7.8 1.0
OG A:SER169 4.7 13.6 1.0
C A:GLU172 4.7 9.6 1.0
CD1 A:PHE175 4.7 10.9 1.0
CG2 A:ILE173 4.8 11.1 1.0
N A:ARG174 4.9 10.4 1.0
CG1 A:ILE173 4.9 10.1 1.0
CB A:SER170 5.0 10.2 1.0

Magnesium binding site 2 out of 2 in 7qou

Go back to Magnesium Binding Sites List in 7qou
Magnesium binding site 2 out of 2 in the A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:36.4
occ:1.00
OD2 A:ASP108 4.0 11.8 1.0
OD1 A:ASP108 4.0 12.7 1.0
OE2 A:GLU183 4.1 49.6 1.0
CG A:ASP108 4.5 11.5 1.0
NE2 A:GLN180 4.8 13.1 1.0

Reference:

J.C.Van Wyk, D.A.Cowan, M.J.Danson, T.L.Tsekoa, M.F.Sayed, B.T.Sewell. A Mutant of the Nitrile Hydratase From Geobacillus Pallidus Having Enhanced Thermostability To Be Published.
Page generated: Thu Oct 3 05:15:36 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy