Magnesium in PDB 7r8i: Crystal Structure of Pseudooceanicola Lipolyticus Argonaute Bound to 5' Oh Guide Dna in the Presence of MG2+

The structure of Crystal Structure of Pseudooceanicola Lipolyticus Argonaute Bound to 5' Oh Guide Dna in the Presence of MG2+, PDB code: 7r8i was solved by Y.Shin, K.S.Murakami, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.73 / 2.40
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	200.019, 200.019, 200.019, 90, 90, 90
R / Rfree (%)	21.3 / 24.8

The binding sites of Magnesium atom in the Crystal Structure of Pseudooceanicola Lipolyticus Argonaute Bound to 5' Oh Guide Dna in the Presence of MG2+ (pdb code 7r8i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Pseudooceanicola Lipolyticus Argonaute Bound to 5' Oh Guide Dna in the Presence of MG2+, PDB code: 7r8i:

Magnesium binding site 1 out of 1 in the Crystal Structure of Pseudooceanicola Lipolyticus Argonaute Bound to 5' Oh Guide Dna in the Presence of MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Pseudooceanicola Lipolyticus Argonaute Bound to 5' Oh Guide Dna in the Presence of MG2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg801 b:83.3 occ:1.00 NH1 A:ARG174 3.4 76.6 1.0 N7 T:DA9 3.6 80.6 1.0 OP2 T:DC8 3.9 72.1 1.0 OD2 A:ASP717 3.9 62.9 1.0 O T:HOH104 4.2 61.5 1.0 N7 T:DG10 4.3 93.9 1.0 O6 T:DG10 4.4 85.3 1.0 C8 T:DA9 4.4 82.3 1.0 CZ A:ARG174 4.6 77.9 1.0 N6 T:DA9 4.6 69.1 1.0 C5 T:DA9 4.7 77.6 1.0 NH2 A:ARG670 4.7 56.9 1.0 OD2 A:ASP172 4.8 63.0 1.0 CG A:ASP717 4.9 60.9 1.0

Y.Shin, K.S.Murakami. Crystal Structure of Pseudooceanicola Lipolyticus Argonaute Bound to 5' Oh Guide Dna in the Presence of MG2+ To Be Published.