Magnesium in PDB 7r91: Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex

The binding sites of Magnesium atom in the Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex (pdb code 7r91). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex, PDB code: 7r91:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:83.3 occ:1.00 O2B A:ADP401 2.2 27.2 1.0 PB A:ADP401 3.6 27.2 1.0 O3B A:ADP401 3.9 27.2 1.0 O2A A:ADP401 4.0 27.2 1.0 OE1 A:GLN137 4.1 33.1 1.0 OD2 A:ASP154 4.1 28.0 1.0 NZ A:LYS18 4.1 27.4 1.0 CD A:GLN137 4.4 33.1 1.0 O3A A:ADP401 4.4 27.2 1.0 NE2 A:GLN137 4.4 33.1 1.0 OD2 A:ASP11 4.4 32.5 1.0 OD1 A:ASP11 4.4 32.5 1.0 CA A:GLY156 4.5 25.8 1.0 O1B A:ADP401 4.7 27.2 1.0 PA A:ADP401 4.7 27.2 1.0 OD1 A:ASP154 4.7 28.0 1.0 CG A:ASP154 4.9 28.0 1.0 CG A:ASP11 4.9 32.5 1.0 N A:GLY156 4.9 25.8 1.0 CA A:GLY13 4.9 28.0 1.0 CG2 A:VAL339 4.9 27.8 1.0 CE A:LYS18 5.0 27.4 1.0

Magnesium binding site 2 out of 3 in the Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:83.3 occ:1.00 O2B B:ADP401 2.2 27.2 1.0 PB B:ADP401 3.6 27.2 1.0 O3B B:ADP401 3.9 27.2 1.0 O2A B:ADP401 4.0 27.2 1.0 OE1 B:GLN137 4.1 33.1 1.0 OD2 B:ASP154 4.1 28.0 1.0 NZ B:LYS18 4.1 27.4 1.0 CD B:GLN137 4.4 33.1 1.0 O3A B:ADP401 4.4 27.2 1.0 NE2 B:GLN137 4.4 33.1 1.0 OD2 B:ASP11 4.4 32.5 1.0 OD1 B:ASP11 4.4 32.5 1.0 CA B:GLY156 4.5 25.8 1.0 O1B B:ADP401 4.7 27.2 1.0 PA B:ADP401 4.7 27.2 1.0 OD1 B:ASP154 4.7 28.0 1.0 CG B:ASP154 4.9 28.0 1.0 CG B:ASP11 4.9 32.5 1.0 N B:GLY156 4.9 25.8 1.0 CA B:GLY13 4.9 28.0 1.0 CG2 B:VAL339 4.9 27.8 1.0 CE B:LYS18 5.0 27.4 1.0

Magnesium binding site 3 out of 3 in the Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cryo-Em Structure of the Rigor State Wild Type Myosin-15-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:83.3 occ:1.00 O2B C:ADP401 2.2 27.2 1.0 PB C:ADP401 3.6 27.2 1.0 O3B C:ADP401 3.9 27.2 1.0 O2A C:ADP401 4.0 27.2 1.0 OE1 C:GLN137 4.1 33.1 1.0 OD2 C:ASP154 4.1 28.0 1.0 NZ C:LYS18 4.1 27.4 1.0 CD C:GLN137 4.4 33.1 1.0 O3A C:ADP401 4.4 27.2 1.0 NE2 C:GLN137 4.4 33.1 1.0 OD2 C:ASP11 4.4 32.5 1.0 OD1 C:ASP11 4.4 32.5 1.0 CA C:GLY156 4.5 25.8 1.0 O1B C:ADP401 4.7 27.2 1.0 PA C:ADP401 4.7 27.2 1.0 OD1 C:ASP154 4.7 28.0 1.0 CG C:ASP154 4.9 28.0 1.0 CG C:ASP11 4.9 32.5 1.0 N C:GLY156 4.9 25.8 1.0 CA C:GLY13 4.9 28.0 1.0 CG2 C:VAL339 4.9 27.8 1.0 CE C:LYS18 5.0 27.4 1.0

R.Gong, F.Jiang, Z.G.Moreland, M.J.Reynolds, P.S.Gurel, A.Shams, M.R.Bowl, J.E.Bird, G.M.Alushin. Structural Basis For Tunable Control of Actin Dynamics By Myosin-15 in Mechanosensory Stereocilia Biorxiv 2021.
DOI: 10.1101/2021.07.09.451843