Magnesium in PDB 7sa3: Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Enzymatic activity of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
All present enzymatic activity of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light:
1.10.3.9;
Other elements in 7sa3:
The structure of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
33;
Binding sites:
The binding sites of Magnesium atom in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
(pdb code 7sa3). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 33 binding sites of Magnesium where determined in the
Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light, PDB code: 7sa3:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 1 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg403
b:26.2
occ:1.00
|
MG
|
A:CLA403
|
0.0
|
26.2
|
1.0
|
ND
|
A:CLA403
|
2.0
|
26.2
|
1.0
|
NB
|
A:CLA403
|
2.1
|
26.2
|
1.0
|
NC
|
A:CLA403
|
2.1
|
26.2
|
1.0
|
NA
|
A:CLA403
|
2.2
|
26.2
|
1.0
|
NE2
|
A:HIS199
|
2.9
|
15.4
|
1.0
|
C4D
|
A:CLA403
|
2.9
|
26.2
|
1.0
|
C4B
|
A:CLA403
|
3.0
|
26.2
|
1.0
|
C1B
|
A:CLA403
|
3.1
|
26.2
|
1.0
|
C1C
|
A:CLA403
|
3.1
|
26.2
|
1.0
|
C1D
|
A:CLA403
|
3.1
|
26.2
|
1.0
|
C4C
|
A:CLA403
|
3.1
|
26.2
|
1.0
|
C4A
|
A:CLA403
|
3.1
|
26.2
|
1.0
|
C1A
|
A:CLA403
|
3.2
|
26.2
|
1.0
|
CHC
|
A:CLA403
|
3.4
|
26.2
|
1.0
|
CHB
|
A:CLA403
|
3.4
|
26.2
|
1.0
|
CHA
|
A:CLA403
|
3.5
|
26.2
|
1.0
|
CE
|
A:MET184
|
3.5
|
16.5
|
1.0
|
CHD
|
A:CLA403
|
3.5
|
26.2
|
1.0
|
CD2
|
A:HIS199
|
3.8
|
15.4
|
1.0
|
CE1
|
A:HIS199
|
3.8
|
15.4
|
1.0
|
C3D
|
A:CLA403
|
4.1
|
26.2
|
1.0
|
CAB
|
D:CLA403
|
4.1
|
15.3
|
1.0
|
C3B
|
A:CLA403
|
4.3
|
26.2
|
1.0
|
C2D
|
A:CLA403
|
4.3
|
26.2
|
1.0
|
C2B
|
A:CLA403
|
4.4
|
26.2
|
1.0
|
C3C
|
A:CLA403
|
4.4
|
26.2
|
1.0
|
C2C
|
A:CLA403
|
4.4
|
26.2
|
1.0
|
C3A
|
A:CLA403
|
4.5
|
26.2
|
1.0
|
C2A
|
A:CLA403
|
4.5
|
26.2
|
1.0
|
CBB
|
D:CLA403
|
4.8
|
15.3
|
1.0
|
CHC
|
D:CLA403
|
4.9
|
15.3
|
1.0
|
CBD
|
A:CLA403
|
4.9
|
26.2
|
1.0
|
ND1
|
A:HIS199
|
4.9
|
15.4
|
1.0
|
CG
|
A:HIS199
|
5.0
|
15.4
|
1.0
|
C3B
|
D:CLA403
|
5.0
|
15.3
|
1.0
|
|
Magnesium binding site 2 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 2 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg404
b:13.0
occ:1.00
|
MG
|
A:CL7404
|
0.0
|
13.0
|
1.0
|
ND
|
A:CL7404
|
2.0
|
13.0
|
1.0
|
NB
|
A:CL7404
|
2.1
|
13.0
|
1.0
|
NC
|
A:CL7404
|
2.1
|
13.0
|
1.0
|
NA
|
A:CL7404
|
2.2
|
13.0
|
1.0
|
C4D
|
A:CL7404
|
2.9
|
13.0
|
1.0
|
O
|
A:HOH533
|
2.9
|
17.4
|
1.0
|
C4B
|
A:CL7404
|
3.0
|
13.0
|
1.0
|
C1C
|
A:CL7404
|
3.1
|
13.0
|
1.0
|
C1B
|
A:CL7404
|
3.1
|
13.0
|
1.0
|
C1D
|
A:CL7404
|
3.1
|
13.0
|
1.0
|
C4C
|
A:CL7404
|
3.1
|
13.0
|
1.0
|
C1A
|
A:CL7404
|
3.2
|
13.0
|
1.0
|
C4A
|
A:CL7404
|
3.2
|
13.0
|
1.0
|
CHC
|
A:CL7404
|
3.3
|
13.0
|
1.0
|
CHB
|
A:CL7404
|
3.4
|
13.0
|
1.0
|
CHA
|
A:CL7404
|
3.5
|
13.0
|
1.0
|
CHD
|
A:CL7404
|
3.6
|
13.0
|
1.0
|
CBB
|
A:PHO406
|
3.8
|
17.4
|
1.0
|
C3D
|
A:CL7404
|
4.1
|
13.0
|
1.0
|
C3B
|
A:CL7404
|
4.3
|
13.0
|
1.0
|
C2D
|
A:CL7404
|
4.4
|
13.0
|
1.0
|
C2B
|
A:CL7404
|
4.4
|
13.0
|
1.0
|
O
|
A:HOH524
|
4.4
|
12.0
|
1.0
|
C2C
|
A:CL7404
|
4.4
|
13.0
|
1.0
|
C3C
|
A:CL7404
|
4.4
|
13.0
|
1.0
|
C2A
|
A:CL7404
|
4.5
|
13.0
|
1.0
|
C3A
|
A:CL7404
|
4.5
|
13.0
|
1.0
|
CG2
|
A:THR180
|
4.5
|
13.8
|
1.0
|
C19
|
A:PHO406
|
4.7
|
17.4
|
1.0
|
CBD
|
A:CL7404
|
4.9
|
13.0
|
1.0
|
|
Magnesium binding site 3 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 3 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg405
b:26.2
occ:1.00
|
MG
|
A:CLA405
|
0.0
|
26.2
|
1.0
|
ND
|
A:CLA405
|
2.0
|
26.2
|
1.0
|
NB
|
A:CLA405
|
2.1
|
26.2
|
1.0
|
NC
|
A:CLA405
|
2.1
|
26.2
|
1.0
|
NA
|
A:CLA405
|
2.2
|
26.2
|
1.0
|
C4D
|
A:CLA405
|
2.9
|
26.2
|
1.0
|
O
|
A:HOH554
|
2.9
|
19.0
|
1.0
|
C4B
|
A:CLA405
|
3.0
|
26.2
|
1.0
|
C1C
|
A:CLA405
|
3.1
|
26.2
|
1.0
|
C1B
|
A:CLA405
|
3.1
|
26.2
|
1.0
|
C1D
|
A:CLA405
|
3.1
|
26.2
|
1.0
|
C4A
|
A:CLA405
|
3.2
|
26.2
|
1.0
|
C1A
|
A:CLA405
|
3.2
|
26.2
|
1.0
|
C4C
|
A:CLA405
|
3.2
|
26.2
|
1.0
|
CHC
|
A:CLA405
|
3.4
|
26.2
|
1.0
|
CHB
|
A:CLA405
|
3.4
|
26.2
|
1.0
|
CHA
|
A:CLA405
|
3.5
|
26.2
|
1.0
|
CHD
|
A:CLA405
|
3.5
|
26.2
|
1.0
|
CBB
|
D:PHO402
|
3.8
|
26.2
|
1.0
|
C3D
|
A:CLA405
|
4.2
|
26.2
|
1.0
|
O
|
D:HOH553
|
4.3
|
15.1
|
1.0
|
C3B
|
A:CLA405
|
4.3
|
26.2
|
1.0
|
C2D
|
A:CLA405
|
4.4
|
26.2
|
1.0
|
C2B
|
A:CLA405
|
4.4
|
26.2
|
1.0
|
C2C
|
A:CLA405
|
4.4
|
26.2
|
1.0
|
C3C
|
A:CLA405
|
4.4
|
26.2
|
1.0
|
C2A
|
A:CLA405
|
4.5
|
26.2
|
1.0
|
C3A
|
A:CLA405
|
4.5
|
26.2
|
1.0
|
CG2
|
D:ILE178
|
4.6
|
14.1
|
1.0
|
C20
|
D:PHO402
|
4.9
|
26.2
|
1.0
|
CBD
|
A:CLA405
|
4.9
|
26.2
|
1.0
|
O1A
|
A:CLA405
|
5.0
|
26.2
|
1.0
|
|
Magnesium binding site 4 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 4 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg407
b:27.5
occ:1.00
|
MG
|
A:CLA407
|
0.0
|
27.5
|
1.0
|
ND
|
A:CLA407
|
2.0
|
27.5
|
1.0
|
NB
|
A:CLA407
|
2.1
|
27.5
|
1.0
|
NC
|
A:CLA407
|
2.1
|
27.5
|
1.0
|
NA
|
A:CLA407
|
2.2
|
27.5
|
1.0
|
NE2
|
A:HIS119
|
2.7
|
21.1
|
1.0
|
C4D
|
A:CLA407
|
2.9
|
27.5
|
1.0
|
C4B
|
A:CLA407
|
3.0
|
27.5
|
1.0
|
C1B
|
A:CLA407
|
3.1
|
27.5
|
1.0
|
C1C
|
A:CLA407
|
3.1
|
27.5
|
1.0
|
C1D
|
A:CLA407
|
3.1
|
27.5
|
1.0
|
C4C
|
A:CLA407
|
3.1
|
27.5
|
1.0
|
C4A
|
A:CLA407
|
3.2
|
27.5
|
1.0
|
C1A
|
A:CLA407
|
3.2
|
27.5
|
1.0
|
CHC
|
A:CLA407
|
3.4
|
27.5
|
1.0
|
CHB
|
A:CLA407
|
3.4
|
27.5
|
1.0
|
CHA
|
A:CLA407
|
3.5
|
27.5
|
1.0
|
CHD
|
A:CLA407
|
3.5
|
27.5
|
1.0
|
CD2
|
A:HIS119
|
3.6
|
21.1
|
1.0
|
CE1
|
A:HIS119
|
3.7
|
21.1
|
1.0
|
CG1
|
I:VAL8
|
4.0
|
33.6
|
1.0
|
CG2
|
I:VAL12
|
4.1
|
33.7
|
1.0
|
C3D
|
A:CLA407
|
4.2
|
27.5
|
1.0
|
C3B
|
A:CLA407
|
4.3
|
27.5
|
1.0
|
C2D
|
A:CLA407
|
4.4
|
27.5
|
1.0
|
C2B
|
A:CLA407
|
4.4
|
27.5
|
1.0
|
C2C
|
A:CLA407
|
4.4
|
27.5
|
1.0
|
C3C
|
A:CLA407
|
4.4
|
27.5
|
1.0
|
C3A
|
A:CLA407
|
4.5
|
27.5
|
1.0
|
C2A
|
A:CLA407
|
4.5
|
27.5
|
1.0
|
CG
|
A:HIS119
|
4.8
|
21.1
|
1.0
|
ND1
|
A:HIS119
|
4.8
|
21.1
|
1.0
|
CG2
|
A:VAL44
|
4.8
|
24.9
|
1.0
|
CBA
|
A:CLA407
|
4.9
|
27.5
|
1.0
|
CBD
|
A:CLA407
|
5.0
|
27.5
|
1.0
|
CG2
|
I:VAL8
|
5.0
|
33.6
|
1.0
|
|
Magnesium binding site 5 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 5 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg601
b:26.3
occ:1.00
|
MG
|
B:CLA601
|
0.0
|
26.3
|
1.0
|
ND
|
B:CLA601
|
2.0
|
26.3
|
1.0
|
NB
|
B:CLA601
|
2.1
|
26.3
|
1.0
|
NC
|
B:CLA601
|
2.1
|
26.3
|
1.0
|
NA
|
B:CLA601
|
2.2
|
26.3
|
1.0
|
ND1
|
B:HIS201
|
2.6
|
24.0
|
1.0
|
C4D
|
B:CLA601
|
2.9
|
26.3
|
1.0
|
C4B
|
B:CLA601
|
3.0
|
26.3
|
1.0
|
C1B
|
B:CLA601
|
3.1
|
26.3
|
1.0
|
C1C
|
B:CLA601
|
3.1
|
26.3
|
1.0
|
C1D
|
B:CLA601
|
3.1
|
26.3
|
1.0
|
C4A
|
B:CLA601
|
3.1
|
26.3
|
1.0
|
C4C
|
B:CLA601
|
3.2
|
26.3
|
1.0
|
C1A
|
B:CLA601
|
3.2
|
26.3
|
1.0
|
CHC
|
B:CLA601
|
3.4
|
26.3
|
1.0
|
CHB
|
B:CLA601
|
3.4
|
26.3
|
1.0
|
CE1
|
B:HIS201
|
3.4
|
24.0
|
1.0
|
CHA
|
B:CLA601
|
3.5
|
26.3
|
1.0
|
CHD
|
B:CLA601
|
3.5
|
26.3
|
1.0
|
CG
|
B:HIS201
|
3.7
|
24.0
|
1.0
|
C7B
|
B:DGD616
|
3.9
|
30.7
|
1.0
|
CB
|
B:HIS201
|
4.0
|
24.0
|
1.0
|
C3D
|
B:CLA601
|
4.1
|
26.3
|
1.0
|
C5B
|
B:DGD616
|
4.2
|
30.7
|
1.0
|
C9B
|
B:DGD616
|
4.3
|
30.7
|
1.0
|
C3B
|
B:CLA601
|
4.3
|
26.3
|
1.0
|
C2D
|
B:CLA601
|
4.4
|
26.3
|
1.0
|
C2B
|
B:CLA601
|
4.4
|
26.3
|
1.0
|
CE1
|
B:PHE190
|
4.4
|
31.5
|
1.0
|
C2C
|
B:CLA601
|
4.4
|
26.3
|
1.0
|
C3C
|
B:CLA601
|
4.4
|
26.3
|
1.0
|
C3A
|
B:CLA601
|
4.5
|
26.3
|
1.0
|
C2A
|
B:CLA601
|
4.5
|
26.3
|
1.0
|
NE2
|
B:HIS201
|
4.7
|
24.0
|
1.0
|
C8B
|
B:DGD616
|
4.7
|
30.7
|
1.0
|
CA
|
B:HIS201
|
4.7
|
24.0
|
1.0
|
CD2
|
B:HIS201
|
4.8
|
24.0
|
1.0
|
C6B
|
B:DGD616
|
4.8
|
30.7
|
1.0
|
CD1
|
B:PHE190
|
4.9
|
31.5
|
1.0
|
CBD
|
B:CLA601
|
5.0
|
26.3
|
1.0
|
|
Magnesium binding site 6 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 6 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg602
b:16.8
occ:1.00
|
MG
|
B:CLA602
|
0.0
|
16.8
|
1.0
|
ND
|
B:CLA602
|
2.0
|
16.8
|
1.0
|
NB
|
B:CLA602
|
2.1
|
16.8
|
1.0
|
NC
|
B:CLA602
|
2.1
|
16.8
|
1.0
|
NA
|
B:CLA602
|
2.2
|
16.8
|
1.0
|
NE2
|
B:HIS202
|
2.5
|
22.9
|
1.0
|
C4D
|
B:CLA602
|
2.9
|
16.8
|
1.0
|
C4B
|
B:CLA602
|
3.0
|
16.8
|
1.0
|
C1B
|
B:CLA602
|
3.1
|
16.8
|
1.0
|
C1D
|
B:CLA602
|
3.1
|
16.8
|
1.0
|
C1C
|
B:CLA602
|
3.1
|
16.8
|
1.0
|
C4C
|
B:CLA602
|
3.2
|
16.8
|
1.0
|
C4A
|
B:CLA602
|
3.2
|
16.8
|
1.0
|
C1A
|
B:CLA602
|
3.2
|
16.8
|
1.0
|
CE1
|
B:HIS202
|
3.3
|
22.9
|
1.0
|
CHC
|
B:CLA602
|
3.4
|
16.8
|
1.0
|
CHB
|
B:CLA602
|
3.4
|
16.8
|
1.0
|
CHA
|
B:CLA602
|
3.5
|
16.8
|
1.0
|
CHD
|
B:CLA602
|
3.5
|
16.8
|
1.0
|
CD2
|
B:HIS202
|
3.6
|
22.9
|
1.0
|
C5
|
B:F6C603
|
3.6
|
20.0
|
1.0
|
C3
|
B:F6C603
|
4.1
|
20.0
|
1.0
|
C3D
|
B:CLA602
|
4.1
|
16.8
|
1.0
|
C2D
|
B:CLA602
|
4.3
|
16.8
|
1.0
|
C3B
|
B:CLA602
|
4.3
|
16.8
|
1.0
|
C2B
|
B:CLA602
|
4.4
|
16.8
|
1.0
|
C2C
|
B:CLA602
|
4.4
|
16.8
|
1.0
|
C3C
|
B:CLA602
|
4.4
|
16.8
|
1.0
|
ND1
|
B:HIS202
|
4.5
|
22.9
|
1.0
|
C3A
|
B:CLA602
|
4.5
|
16.8
|
1.0
|
C2A
|
B:CLA602
|
4.5
|
16.8
|
1.0
|
C2
|
B:F6C603
|
4.5
|
20.0
|
1.0
|
C1
|
B:F6C603
|
4.5
|
20.0
|
1.0
|
CG
|
B:HIS202
|
4.6
|
22.9
|
1.0
|
C4
|
B:F6C603
|
4.8
|
20.0
|
1.0
|
CBD
|
B:CLA602
|
4.9
|
16.8
|
1.0
|
|
Magnesium binding site 7 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 7 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg603
b:20.0
occ:1.00
|
MG
|
B:F6C603
|
0.0
|
20.0
|
1.0
|
ND
|
B:F6C603
|
2.0
|
20.0
|
1.0
|
NB
|
B:F6C603
|
2.1
|
20.0
|
1.0
|
NC
|
B:F6C603
|
2.1
|
20.0
|
1.0
|
NA
|
B:F6C603
|
2.2
|
20.0
|
1.0
|
NE2
|
B:HIS455
|
2.5
|
10.4
|
1.0
|
C4D
|
B:F6C603
|
2.9
|
20.0
|
1.0
|
C4B
|
B:F6C603
|
3.0
|
20.0
|
1.0
|
C1B
|
B:F6C603
|
3.1
|
20.0
|
1.0
|
C1C
|
B:F6C603
|
3.1
|
20.0
|
1.0
|
C1D
|
B:F6C603
|
3.1
|
20.0
|
1.0
|
C4A
|
B:F6C603
|
3.2
|
20.0
|
1.0
|
C4C
|
B:F6C603
|
3.2
|
20.0
|
1.0
|
C1A
|
B:F6C603
|
3.2
|
20.0
|
1.0
|
CD2
|
B:HIS455
|
3.3
|
10.4
|
1.0
|
CHC
|
B:F6C603
|
3.4
|
20.0
|
1.0
|
CHB
|
B:F6C603
|
3.4
|
20.0
|
1.0
|
C16
|
B:CLA611
|
3.5
|
19.0
|
1.0
|
CHA
|
B:F6C603
|
3.5
|
20.0
|
1.0
|
CHD
|
B:F6C603
|
3.6
|
20.0
|
1.0
|
CE1
|
B:HIS455
|
3.6
|
10.4
|
1.0
|
C3D
|
B:F6C603
|
4.2
|
20.0
|
1.0
|
C14
|
B:CLA611
|
4.2
|
19.0
|
1.0
|
C17
|
B:CLA611
|
4.2
|
19.0
|
1.0
|
C3B
|
B:F6C603
|
4.3
|
20.0
|
1.0
|
C2B
|
B:F6C603
|
4.4
|
20.0
|
1.0
|
C15
|
B:CLA611
|
4.4
|
19.0
|
1.0
|
C2D
|
B:F6C603
|
4.4
|
20.0
|
1.0
|
C2C
|
B:F6C603
|
4.4
|
20.0
|
1.0
|
C13
|
B:CLA611
|
4.4
|
19.0
|
1.0
|
C3C
|
B:F6C603
|
4.5
|
20.0
|
1.0
|
C3A
|
B:F6C603
|
4.5
|
20.0
|
1.0
|
C2A
|
B:F6C603
|
4.5
|
20.0
|
1.0
|
CG
|
B:HIS455
|
4.6
|
10.4
|
1.0
|
ND1
|
B:HIS455
|
4.7
|
10.4
|
1.0
|
CBB
|
B:F6C612
|
4.9
|
16.4
|
1.0
|
CZ
|
B:PHE451
|
5.0
|
11.4
|
1.0
|
CBD
|
B:F6C603
|
5.0
|
20.0
|
1.0
|
CAB
|
B:F6C612
|
5.0
|
16.4
|
1.0
|
|
Magnesium binding site 8 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 8 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg604
b:16.4
occ:1.00
|
MG
|
B:CLA604
|
0.0
|
16.4
|
1.0
|
ND
|
B:CLA604
|
2.0
|
16.4
|
1.0
|
NB
|
B:CLA604
|
2.1
|
16.4
|
1.0
|
NC
|
B:CLA604
|
2.1
|
16.4
|
1.0
|
NA
|
B:CLA604
|
2.2
|
16.4
|
1.0
|
NE2
|
B:HIS100
|
2.4
|
23.4
|
1.0
|
C4D
|
B:CLA604
|
2.9
|
16.4
|
1.0
|
C4B
|
B:CLA604
|
3.0
|
16.4
|
1.0
|
C1B
|
B:CLA604
|
3.1
|
16.4
|
1.0
|
C1C
|
B:CLA604
|
3.1
|
16.4
|
1.0
|
C1D
|
B:CLA604
|
3.1
|
16.4
|
1.0
|
C4A
|
B:CLA604
|
3.2
|
16.4
|
1.0
|
C1A
|
B:CLA604
|
3.2
|
16.4
|
1.0
|
C4C
|
B:CLA604
|
3.2
|
16.4
|
1.0
|
CHC
|
B:CLA604
|
3.4
|
16.4
|
1.0
|
CE1
|
B:HIS100
|
3.4
|
23.4
|
1.0
|
CD2
|
B:HIS100
|
3.4
|
23.4
|
1.0
|
CHB
|
B:CLA604
|
3.4
|
16.4
|
1.0
|
CHA
|
B:CLA604
|
3.5
|
16.4
|
1.0
|
CHD
|
B:CLA604
|
3.6
|
16.4
|
1.0
|
C2
|
B:CLA604
|
3.7
|
16.4
|
1.0
|
C3
|
B:CLA604
|
3.7
|
16.4
|
1.0
|
C6
|
B:CLA604
|
3.9
|
16.4
|
1.0
|
C1
|
B:CLA604
|
3.9
|
16.4
|
1.0
|
C5
|
B:CLA604
|
4.0
|
16.4
|
1.0
|
C7
|
B:CLA604
|
4.0
|
16.4
|
1.0
|
C3D
|
B:CLA604
|
4.2
|
16.4
|
1.0
|
C4
|
B:CLA604
|
4.3
|
16.4
|
1.0
|
C3B
|
B:CLA604
|
4.3
|
16.4
|
1.0
|
C2B
|
B:CLA604
|
4.4
|
16.4
|
1.0
|
C2D
|
B:CLA604
|
4.4
|
16.4
|
1.0
|
C2C
|
B:CLA604
|
4.4
|
16.4
|
1.0
|
C3C
|
B:CLA604
|
4.5
|
16.4
|
1.0
|
C3A
|
B:CLA604
|
4.5
|
16.4
|
1.0
|
ND1
|
B:HIS100
|
4.5
|
23.4
|
1.0
|
C2A
|
B:CLA604
|
4.5
|
16.4
|
1.0
|
CG
|
B:HIS100
|
4.6
|
23.4
|
1.0
|
CBD
|
B:CLA604
|
5.0
|
16.4
|
1.0
|
|
Magnesium binding site 9 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 9 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg605
b:21.8
occ:1.00
|
MG
|
B:CLA605
|
0.0
|
21.8
|
1.0
|
ND
|
B:CLA605
|
2.0
|
21.8
|
1.0
|
NB
|
B:CLA605
|
2.1
|
21.8
|
1.0
|
NC
|
B:CLA605
|
2.1
|
21.8
|
1.0
|
NA
|
B:CLA605
|
2.2
|
21.8
|
1.0
|
ND1
|
B:HIS157
|
2.7
|
24.9
|
1.0
|
C4D
|
B:CLA605
|
2.9
|
21.8
|
1.0
|
C4B
|
B:CLA605
|
3.0
|
21.8
|
1.0
|
C1B
|
B:CLA605
|
3.1
|
21.8
|
1.0
|
C1C
|
B:CLA605
|
3.1
|
21.8
|
1.0
|
C1D
|
B:CLA605
|
3.1
|
21.8
|
1.0
|
C4C
|
B:CLA605
|
3.1
|
21.8
|
1.0
|
C1A
|
B:CLA605
|
3.1
|
21.8
|
1.0
|
C4A
|
B:CLA605
|
3.2
|
21.8
|
1.0
|
CHC
|
B:CLA605
|
3.4
|
21.8
|
1.0
|
CE1
|
B:HIS157
|
3.4
|
24.9
|
1.0
|
CHB
|
B:CLA605
|
3.5
|
21.8
|
1.0
|
CHA
|
B:CLA605
|
3.5
|
21.8
|
1.0
|
CHD
|
B:CLA605
|
3.5
|
21.8
|
1.0
|
CG
|
B:HIS157
|
3.9
|
24.9
|
1.0
|
C3D
|
B:CLA605
|
4.1
|
21.8
|
1.0
|
CB
|
B:HIS157
|
4.3
|
24.9
|
1.0
|
C3B
|
B:CLA605
|
4.3
|
21.8
|
1.0
|
C2D
|
B:CLA605
|
4.3
|
21.8
|
1.0
|
C2B
|
B:CLA605
|
4.4
|
21.8
|
1.0
|
C2C
|
B:CLA605
|
4.4
|
21.8
|
1.0
|
C3C
|
B:CLA605
|
4.4
|
21.8
|
1.0
|
C2A
|
B:CLA605
|
4.5
|
21.8
|
1.0
|
C3A
|
B:CLA605
|
4.5
|
21.8
|
1.0
|
NE2
|
B:HIS157
|
4.7
|
24.9
|
1.0
|
CD2
|
B:HIS157
|
4.9
|
24.9
|
1.0
|
CMB
|
B:CLA604
|
4.9
|
16.4
|
1.0
|
CBD
|
B:CLA605
|
4.9
|
21.8
|
1.0
|
CBA
|
B:CLA605
|
5.0
|
21.8
|
1.0
|
|
Magnesium binding site 10 out
of 33 in 7sa3
Go back to
Magnesium Binding Sites List in 7sa3
Magnesium binding site 10 out
of 33 in the Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg606
b:22.4
occ:1.00
|
MG
|
B:F6C606
|
0.0
|
22.4
|
1.0
|
ND
|
B:F6C606
|
2.0
|
22.4
|
1.0
|
NB
|
B:F6C606
|
2.1
|
22.4
|
1.0
|
NC
|
B:F6C606
|
2.1
|
22.4
|
1.0
|
NA
|
B:F6C606
|
2.2
|
22.4
|
1.0
|
O
|
B:HOH754
|
2.9
|
23.0
|
1.0
|
C4D
|
B:F6C606
|
2.9
|
22.4
|
1.0
|
C4B
|
B:F6C606
|
3.0
|
22.4
|
1.0
|
C1B
|
B:F6C606
|
3.1
|
22.4
|
1.0
|
C1C
|
B:F6C606
|
3.1
|
22.4
|
1.0
|
C1D
|
B:F6C606
|
3.1
|
22.4
|
1.0
|
C4A
|
B:F6C606
|
3.1
|
22.4
|
1.0
|
C4C
|
B:F6C606
|
3.2
|
22.4
|
1.0
|
C1A
|
B:F6C606
|
3.2
|
22.4
|
1.0
|
C18
|
B:LMG617
|
3.4
|
33.1
|
1.0
|
CHC
|
B:F6C606
|
3.4
|
22.4
|
1.0
|
CHB
|
B:F6C606
|
3.4
|
22.4
|
1.0
|
CHA
|
B:F6C606
|
3.5
|
22.4
|
1.0
|
CHD
|
B:F6C606
|
3.5
|
22.4
|
1.0
|
C19
|
B:LMG617
|
3.9
|
33.1
|
1.0
|
C3D
|
B:F6C606
|
4.2
|
22.4
|
1.0
|
C3B
|
B:F6C606
|
4.3
|
22.4
|
1.0
|
O
|
B:HOH739
|
4.3
|
20.5
|
1.0
|
C2D
|
B:F6C606
|
4.4
|
22.4
|
1.0
|
C17
|
B:LMG617
|
4.4
|
33.1
|
1.0
|
C2B
|
B:F6C606
|
4.4
|
22.4
|
1.0
|
C2C
|
B:F6C606
|
4.4
|
22.4
|
1.0
|
SD
|
B:MET37
|
4.4
|
22.5
|
1.0
|
C3C
|
B:F6C606
|
4.4
|
22.4
|
1.0
|
C16
|
B:LMG617
|
4.5
|
33.1
|
1.0
|
C3A
|
B:F6C606
|
4.5
|
22.4
|
1.0
|
C2A
|
B:F6C606
|
4.5
|
22.4
|
1.0
|
CD2
|
B:PHE61
|
4.7
|
19.1
|
1.0
|
CB
|
B:PHE61
|
4.9
|
19.1
|
1.0
|
CE
|
B:MET37
|
5.0
|
22.5
|
1.0
|
CBD
|
B:F6C606
|
5.0
|
22.4
|
1.0
|
|
Reference:
C.J.Gisriel,
G.Shen,
M.Y.Ho,
V.Kurashov,
D.A.Flesher,
J.Wang,
W.H.Armstrong,
J.H.Golbeck,
M.R.Gunner,
D.J.Vinyard,
R.J.Debus,
G.W.Brudvig,
D.A.Bryant.
Structure of A Monomeric Photosystem II Core Complex From A Cyanobacterium Acclimated to Far-Red Light Reveals the Functions of Chlorophylls D and F. J.Biol.Chem. 01424 2021.
ISSN: ESSN 1083-351X
PubMed: 34801554
DOI: 10.1016/J.JBC.2021.101424
Page generated: Thu Oct 3 08:16:14 2024
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