Magnesium in PDB 7sq0: GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1

The structure of GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1 also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Magnesium atom in the GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1 (pdb code 7sq0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1, PDB code: 7sq0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:44.2 occ:1.00 HG1 A:THR28 1.9 57.9 1.0 OG1 A:THR28 2.5 57.9 1.0 O2B A:ADP401 3.0 73.7 1.0 O1B A:ADP401 3.2 73.7 1.0 PB A:ADP401 3.6 73.7 1.0 HD21 A:ASN57 3.6 69.7 1.0 CB A:THR28 3.7 57.9 1.0 HB2 A:ASN57 3.7 69.7 1.0 HB A:THR28 3.8 57.9 1.0 O3A A:ADP401 4.0 73.7 1.0 HG21 A:THR28 4.1 57.9 1.0 OD2 A:ASP164 4.2 64.4 1.0 H A:THR28 4.2 57.9 1.0 ND2 A:ASN57 4.3 69.7 1.0 O A:ALA55 4.3 71.6 1.0 CG2 A:THR28 4.4 57.9 1.0 OD1 A:ASP164 4.6 64.4 1.0 HG23 A:THR28 4.6 57.9 1.0 CB A:ASN57 4.6 69.7 1.0 HB2 A:LYS27 4.7 60.8 1.0 H A:ASN57 4.7 69.7 1.0 N A:THR28 4.7 57.9 1.0 HD22 A:ASN57 4.7 69.7 1.0 HE3 A:LYS27 4.8 60.8 1.0 CA A:THR28 4.8 57.9 1.0 CG A:ASP164 4.8 64.4 1.0 OD2 A:ASP53 4.8 75.8 1.0 CG A:ASN57 4.9 69.7 1.0 HB3 A:ASP53 4.9 75.8 1.0 HB3 A:ALA55 5.0 71.6 1.0 O1A A:ADP401 5.0 73.7 1.0

Magnesium binding site 2 out of 2 in the GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of GET3 Bound to Adp and the Transmembrane Domain of the Tail-Anchored Protein BOS1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg501 b:44.9 occ:1.00 HG1 B:THR28 2.3 58.1 1.0 OG1 B:THR28 2.5 58.1 1.0 O2B B:ADP401 3.0 73.7 1.0 O1B B:ADP401 3.2 73.7 1.0 PB B:ADP401 3.5 73.7 1.0 HD21 B:ASN57 3.6 69.9 1.0 HB2 B:ASN57 3.7 69.9 1.0 CB B:THR28 3.8 58.1 1.0 HB B:THR28 3.9 58.1 1.0 O3A B:ADP401 4.0 73.7 1.0 H B:THR28 4.1 58.1 1.0 HG21 B:THR28 4.2 58.1 1.0 OD2 B:ASP164 4.2 65.0 1.0 ND2 B:ASN57 4.3 69.9 1.0 O B:ALA55 4.3 71.5 1.0 CG2 B:THR28 4.5 58.1 1.0 OD1 B:ASP164 4.6 65.0 1.0 HB2 B:LYS27 4.6 59.5 1.0 CB B:ASN57 4.6 69.9 1.0 N B:THR28 4.7 58.1 1.0 H B:ASN57 4.7 69.9 1.0 HG22 B:THR28 4.7 58.1 1.0 HD22 B:ASN57 4.7 69.9 1.0 HE3 B:LYS27 4.7 59.5 1.0 OD2 B:ASP53 4.8 75.2 1.0 CA B:THR28 4.8 58.1 1.0 CG B:ASP164 4.8 65.0 1.0 CG B:ASN57 4.9 69.9 1.0 HB3 B:ASP53 4.9 75.2 1.0 O1A B:ADP401 5.0 73.7 1.0 HB3 B:ALA55 5.0 71.5 1.0 O3B B:ADP401 5.0 73.7 1.0

M.Y.Fry, V.Najdrova, A.O.Maggiolo, S.M.Saladi, P.Dolezal, W.M.Clemons Jr.. Structurally Derived Universal Mechanism For the Catalytic Cycle of the Tail-Anchored Targeting Factor GET3. Nat.Struct.Mol.Biol. V. 29 820 2022.
ISSN: ESSN 1545-9985
PubMed: 35851188
DOI: 10.1038/S41594-022-00798-4