Atomistry » Magnesium » PDB 7scw-7sq2 » 7sq2
Atomistry »
  Magnesium »
    PDB 7scw-7sq2 »
      7sq2 »

Magnesium in PDB 7sq2: Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex

Enzymatic activity of Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex

All present enzymatic activity of Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex:
3.1.4.11;

Protein crystallography data

The structure of Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex, PDB code: 7sq2 was solved by S.T.Endo-Streeter, J.Sondek, T.K.Harden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.55 / 2.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 202.837, 90.817, 93.135, 90, 101.19, 90
R / Rfree (%) 19.9 / 26.3

Other elements in 7sq2:

The structure of Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex also contains other interesting chemical elements:

Aluminium (Al) 1 atom
Calcium (Ca) 1 atom
Fluorine (F) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex (pdb code 7sq2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex, PDB code: 7sq2:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7sq2

Go back to Magnesium Binding Sites List in 7sq2
Magnesium binding site 1 out of 2 in the Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:59.1
occ:1.00
O2B A:GDP403 2.3 44.4 1.0
OG1 A:THR186 2.4 65.5 1.0
OG A:SER53 2.5 57.8 1.0
O A:HOH503 2.7 54.8 1.0
O1B A:GDP403 2.8 35.2 1.0
CB A:THR186 2.9 69.1 1.0
PB A:GDP403 3.0 65.8 1.0
F3 A:ALF401 3.1 75.6 1.0
F1 A:ALF401 3.1 103.3 1.0
AL A:ALF401 3.4 67.5 1.0
O A:VAL206 3.5 68.2 1.0
OD1 A:ASP205 3.5 91.7 1.0
CG2 A:THR186 3.6 70.3 1.0
CB A:SER53 3.7 60.8 1.0
NZ A:LYS52 3.7 77.8 1.0
N A:SER53 4.0 67.2 1.0
CE A:LYS52 4.0 73.2 1.0
O3B A:GDP403 4.0 70.8 1.0
CA A:THR186 4.2 64.2 1.0
OD2 A:ASP205 4.2 83.2 1.0
CG A:ASP205 4.2 81.1 1.0
N A:THR186 4.3 67.8 1.0
CB A:LYS52 4.3 66.9 1.0
F2 A:ALF401 4.3 129.7 1.0
O3A A:GDP403 4.4 45.4 1.0
CA A:SER53 4.4 68.9 1.0
O1A A:GDP403 4.4 41.7 1.0
F4 A:ALF401 4.5 85.8 1.0
C A:VAL206 4.6 71.8 1.0
PA A:GDP403 4.8 58.3 1.0
O2A A:GDP403 4.8 83.2 1.0
C A:LYS52 4.9 69.6 1.0
O A:THR186 5.0 66.8 1.0
CA A:LYS52 5.0 66.6 1.0

Magnesium binding site 2 out of 2 in 7sq2

Go back to Magnesium Binding Sites List in 7sq2
Magnesium binding site 2 out of 2 in the Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Reprocessed and Refined Structure of Phospholipase C-Beta and Gq Signaling Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg908

b:90.4
occ:1.00
O B:HOH1056 2.7 74.1 1.0
O B:GLU304 3.6 76.0 1.0
O B:GLN254 3.9 72.9 1.0
CB B:GLN254 4.4 75.4 1.0
NH1 B:ARG817 4.5 57.1 1.0
CG2 B:ILE250 4.6 76.5 1.0
OH B:TYR299 4.6 84.4 1.0
C B:GLN254 4.6 76.5 1.0
C B:GLU304 4.7 77.3 1.0
CZ B:ARG817 4.7 61.4 1.0
CE1 B:HIS821 4.7 79.2 1.0
O B:HOH1080 4.8 79.2 1.0
OD1 B:ASN305 4.8 67.7 1.0
CA B:ASN305 4.9 67.0 1.0
NE B:ARG817 5.0 66.2 1.0

Reference:

S.T.Endo-Streeter, J.Sondek, T.K.Harden. Kinetic Scaffolding Mediated By A Phospholipase C-{Beta} and Gq Signaling Complex Science V. 330 974 2010.
ISSN: ISSN 0036-8075
PubMed: 20966218
DOI: 10.1126/SCIENCE.1193438
Page generated: Thu Oct 3 08:50:19 2024

Last articles

Sr in 1SFC
Sr in 1OQ7
Sr in 1U3E
Sr in 1VC0
Sr in 1F1T
Sr in 1J8G
Sr in 1NVY
Sr in 1TJM
Sr in 1NUV
Sr in 1M6G
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy