Magnesium in PDB 7syx: Structure of the Delta Dii Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Delta Dii)

The structure of Structure of the Delta Dii Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Delta Dii) also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Magnesium atom in the Structure of the Delta Dii Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Delta Dii) (pdb code 7syx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Delta Dii Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Delta Dii), PDB code: 7syx:

Magnesium binding site 1 out of 1 in the Structure of the Delta Dii Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Delta Dii)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Delta Dii Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Delta Dii) within 5.0Å range: probe atom residue distance (Å) B Occ x:Mg1301 b:34.2 occ:1.00 O3A x:GTP1302 2.1 47.6 1.0 O3G x:GTP1302 2.5 47.6 1.0 N x:ASP639 2.6 39.6 1.0 O1A x:GTP1302 2.9 47.6 1.0 PA x:GTP1302 3.1 47.6 1.0 CA x:ASP639 3.1 39.6 1.0 PB x:GTP1302 3.2 47.6 1.0 O3B x:GTP1302 3.5 47.6 1.0 PG x:GTP1302 3.5 47.6 1.0 O2B x:GTP1302 3.5 47.6 1.0 C x:VAL638 3.7 41.7 1.0 CA x:VAL638 3.9 41.7 1.0 O5' x:GTP1302 4.0 47.6 1.0 CB x:ASP639 4.2 39.6 1.0 O x:GLY661 4.2 49.6 1.0 N x:THR640 4.2 45.0 1.0 C x:ASP639 4.2 39.6 1.0 CG1 x:VAL638 4.2 41.7 1.0 O2A x:GTP1302 4.2 47.6 1.0 OD1 x:ASP639 4.4 39.6 1.0 O2G x:GTP1302 4.4 47.6 1.0 O1B x:GTP1302 4.5 47.6 1.0 O x:HIS637 4.5 46.0 1.0 O1G x:GTP1302 4.6 47.6 1.0 CB x:VAL638 4.7 41.7 1.0 NZ x:LYS642 4.7 41.5 1.0 O x:VAL638 4.8 41.7 1.0 CG x:ASP639 4.8 39.6 1.0

Z.P.Brown, I.S.Abaeva, S.De, C.U.T.Hellen, T.V.Pestova, J.Frank. Comprehensive Structural Overview of the Hcv Ires-Mediated Translation Initiation Pathway To Be Published.