Magnesium in PDB 7te5: Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis

The structure of Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis, PDB code: 7te5 was solved by Y.Kim, G.Chhor, M.Endres, G.Babnigg, O.Schneewind, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.31 / 1.85
Space group	P 31
Cell size a, b, c (Å), α, β, γ (°)	66.442, 66.442, 122.546, 90, 90, 120
R / Rfree (%)	16.7 / 20.7

The binding sites of Magnesium atom in the Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis (pdb code 7te5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis, PDB code: 7te5:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:27.4 occ:1.00 NE2 A:HIS61 2.0 31.6 1.0 NE2 A:HIS63 2.0 29.8 1.0 NE2 A:HIS105 2.0 31.5 1.0 CE1 A:HIS61 2.7 31.4 1.0 CE1 A:HIS105 2.9 32.2 1.0 CE1 A:HIS63 2.9 30.5 1.0 O A:HOH507 3.0 32.2 1.0 CD2 A:HIS63 3.0 30.9 1.0 CD2 A:HIS61 3.2 30.5 1.0 CD2 A:HIS105 3.2 32.3 1.0 ND1 A:HIS61 3.9 31.5 1.0 ND1 A:HIS63 4.0 30.7 1.0 ND1 A:HIS105 4.0 33.5 1.0 CG A:HIS63 4.1 29.6 1.0 CG A:HIS61 4.1 30.0 1.0 CG A:HIS105 4.2 32.9 1.0 OE1 A:GLN124 4.4 32.0 1.0 O B:HOH409 5.0 29.9 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg301 b:22.8 occ:1.00 NE2 B:HIS105 2.0 32.7 1.0 O B:HOH426 2.0 31.1 1.0 NE2 B:HIS61 2.2 30.9 1.0 OE2 B:GLU107 2.3 37.1 1.0 NE2 B:HIS63 2.4 31.2 1.0 CE1 B:HIS105 2.6 31.7 1.0 CD2 B:HIS63 3.0 30.9 1.0 CD2 B:HIS61 3.1 31.6 1.0 CE1 B:HIS61 3.2 30.1 1.0 CD2 B:HIS105 3.2 31.9 1.0 CD B:GLU107 3.4 36.9 1.0 CE1 B:HIS63 3.6 30.4 1.0 ND1 B:HIS105 3.8 31.3 1.0 O B:HOH559 3.8 34.0 1.0 CG B:HIS105 4.1 32.4 1.0 CG B:GLU107 4.2 32.9 1.0 ND1 B:HIS61 4.2 32.5 1.0 CG B:HIS61 4.3 30.6 1.0 OE1 B:GLU107 4.3 38.7 1.0 CG B:HIS63 4.3 30.5 1.0 O B:HOH498 4.3 33.0 1.0 ND1 B:HIS63 4.5 31.0 1.0

Y.Kim, G.Chhor, M.Endres, G.Babnigg, O.Schneewind, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of the Pirin Family Protein Redox-Sensitive Bicupin Yhak From Yersinia Pestis To Be Published.