Magnesium in PDB 7tmo: V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1

All present enzymatic activity of V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1:
7.1.2.2;

The binding sites of Magnesium atom in the V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1 (pdb code 7tmo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1, PDB code: 7tmo:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg702 b:26.5 occ:1.00 OG1 A:THR263 1.9 24.8 1.0 O1G A:ATP701 2.0 25.9 1.0 O2B A:ATP701 2.7 25.9 1.0 PG A:ATP701 3.2 25.9 1.0 CB A:THR263 3.4 24.8 1.0 O3B A:ATP701 3.7 25.9 1.0 OD1 A:ASP355 3.8 29.8 1.0 O2G A:ATP701 3.8 25.9 1.0 PB A:ATP701 3.9 25.9 1.0 N A:THR263 4.0 24.8 1.0 CA A:THR263 4.1 24.8 1.0 CG2 A:THR263 4.1 24.8 1.0 CE A:LYS262 4.3 23.6 1.0 CG A:ASP355 4.3 29.8 1.0 NH1 A:ARG286 4.4 26.6 1.0 OD2 A:ASP355 4.5 29.8 1.0 O3G A:ATP701 4.5 25.9 1.0 O A:ASP355 4.6 29.8 1.0 NZ A:LYS262 4.7 23.6 1.0 OG A:SER356 4.8 33.3 1.0 O3A A:ATP701 4.8 25.9 1.0 O1A A:ATP701 4.9 25.9 1.0 O1B A:ATP701 4.9 25.9 1.0 CB A:LYS262 5.0 23.6 1.0 C A:LYS262 5.0 23.6 1.0

Magnesium binding site 2 out of 2 in the V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of V1 Complex Lacking Subunit C From Saccharomyces Cerevisiae, State 1 within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg702 b:44.6 occ:1.00 OG1 E:THR263 2.1 35.4 1.0 O1B E:ADP701 2.8 38.5 1.0 NH1 E:ARG286 3.3 35.1 1.0 CB E:THR263 3.4 35.4 1.0 PB E:ADP701 3.8 38.5 1.0 O3B E:ADP701 4.1 38.5 1.0 CG2 E:THR263 4.1 35.4 1.0 CZ E:ARG286 4.2 35.1 1.0 NH2 E:ARG286 4.3 35.1 1.0 CA E:THR263 4.4 35.4 1.0 O2B E:ADP701 4.5 38.5 1.0 N E:THR263 4.6 35.4 1.0

T.Vasanthakumar, K.A.Keon, S.A.Bueler, M.C.Jaskolka, J.L.Rubinstein. Coordinated Conformational Changes in the V 1 Complex During V-Atpase Reversible Dissociation. Nat.Struct.Mol.Biol. V. 29 430 2022.
ISSN: ESSN 1545-9985
PubMed: 35469063
DOI: 10.1038/S41594-022-00757-Z