Magnesium in PDB 7u4h: Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis

The structure of Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis, PDB code: 7u4h was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.60 / 3.10
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	175.79, 175.79, 339.7, 90, 90, 120
R / Rfree (%)	19.2 / 21.6

The structure of Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Magnesium atom in the Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis (pdb code 7u4h). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis, PDB code: 7u4h:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1001 b:48.0 occ:1.00 OD1 A:ASP653 2.0 68.5 1.0 OE2 A:GLU660 2.1 70.8 1.0 O A:TYR655 2.1 60.5 1.0 O A:GLU650 2.3 65.2 1.0 OE1 A:GLU660 2.7 73.3 1.0 CD A:GLU660 2.7 69.0 1.0 CG A:ASP653 2.8 61.5 1.0 OD2 A:ASP653 2.9 57.0 1.0 C A:TYR655 3.3 58.6 1.0 C A:GLU650 3.5 70.2 1.0 N A:TYR655 4.0 53.2 1.0 CG A:GLU650 4.1 71.2 1.0 CA A:TYR655 4.1 51.0 1.0 CG A:GLU660 4.2 63.7 1.0 CB A:ASP653 4.2 59.1 1.0 O A:ASP653 4.2 54.7 1.0 CA A:GLU650 4.3 73.8 1.0 N A:VAL656 4.3 58.6 1.0 N A:LEU651 4.4 76.2 1.0 CA A:LEU651 4.4 72.1 1.0 CB A:TYR655 4.4 55.7 1.0 C A:ASP653 4.5 52.4 1.0 CA A:VAL656 4.5 59.5 1.0 N A:SER657 4.7 63.4 1.0 CA A:ASP653 4.7 61.0 1.0 CD2 A:LEU651 4.7 70.1 1.0 N A:ASP653 4.8 69.1 1.0 CB A:GLU650 4.8 75.2 1.0 C A:LEU651 5.0 72.7 1.0 CD1 A:TYR655 5.0 54.2 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1001 b:62.6 occ:1.00 OD1 B:ASP653 2.1 72.6 1.0 O B:TYR655 2.2 68.1 1.0 OE2 B:GLU660 2.2 74.4 1.0 O B:GLU650 2.3 73.7 1.0 O B:HOH1101 2.5 64.8 1.0 OE1 B:GLU660 2.6 78.9 1.0 CD B:GLU660 2.7 72.7 1.0 O B:HOH1113 2.8 59.9 1.0 CG B:ASP653 3.0 67.9 1.0 OD2 B:ASP653 3.3 65.3 1.0 C B:TYR655 3.3 65.0 1.0 C B:GLU650 3.4 77.7 1.0 N B:TYR655 3.9 62.0 1.0 O B:ASP653 4.0 63.7 1.0 CA B:TYR655 4.1 62.9 1.0 CA B:LEU651 4.2 80.1 1.0 CG B:GLU660 4.2 66.6 1.0 N B:LEU651 4.2 83.6 1.0 C B:ASP653 4.3 65.3 1.0 CG B:GLU650 4.3 80.2 1.0 CA B:GLU650 4.3 80.4 1.0 CB B:ASP653 4.3 66.0 1.0 N B:VAL656 4.4 64.3 1.0 CB B:TYR655 4.5 63.0 1.0 CA B:VAL656 4.6 69.9 1.0 N B:ASP653 4.7 72.3 1.0 CA B:ASP653 4.7 66.8 1.0 C B:LEU651 4.8 79.6 1.0 CB B:GLU650 4.9 81.8 1.0 C B:THR654 4.9 61.4 1.0 N B:THR654 4.9 61.9 1.0 N B:SER657 4.9 72.9 1.0

J.Abendroth, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Crystal Structure of Penicillin-Binding Protein 1A (PBP1A) From Chlamydia Trachomatis To Be Published.