Magnesium in PDB 7ue6: PANK3 Complex Structure with Compound Pz-3802

Enzymatic activity of PANK3 Complex Structure with Compound Pz-3802

All present enzymatic activity of PANK3 Complex Structure with Compound Pz-3802:
2.7.1.33;

Protein crystallography data

The structure of PANK3 Complex Structure with Compound Pz-3802, PDB code: 7ue6 was solved by S.W.White, M.Yun, R.E.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.02 / 1.74
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 97.837, 97.837, 69.166, 90, 90, 120
R / Rfree (%) 17.9 / 20.5

Other elements in 7ue6:

The structure of PANK3 Complex Structure with Compound Pz-3802 also contains other interesting chemical elements:

Fluorine (F) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the PANK3 Complex Structure with Compound Pz-3802 (pdb code 7ue6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the PANK3 Complex Structure with Compound Pz-3802, PDB code: 7ue6:

Magnesium binding site 1 out of 1 in 7ue6

Go back to Magnesium Binding Sites List in 7ue6
Magnesium binding site 1 out of 1 in the PANK3 Complex Structure with Compound Pz-3802


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of PANK3 Complex Structure with Compound Pz-3802 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg407

b:17.1
occ:1.00
O1B A:ANP406 2.0 17.2 1.0
O A:HOH553 2.0 15.9 1.0
O3G A:ANP406 2.1 19.4 1.0
O A:HOH557 2.1 16.5 1.0
O A:HOH575 2.2 17.1 1.0
O A:HOH565 2.3 16.8 1.0
PB A:ANP406 3.3 14.3 1.0
PG A:ANP406 3.3 18.8 1.0
N3B A:ANP406 3.7 16.0 1.0
O3A A:ANP406 3.8 11.3 1.0
O2G A:ANP406 4.0 19.0 1.0
O A:HOH541 4.0 18.1 1.0
NZ A:LYS24 4.1 12.7 1.0
O2A A:ANP406 4.1 12.6 1.0
O A:HOH597 4.2 21.1 1.0
O A:HOH533 4.2 14.6 1.0
O A:HOH659 4.2 36.8 1.0
OE1 A:GLU138 4.2 25.6 1.0
OD2 A:ASP17 4.2 15.0 1.0
OD1 A:ASP17 4.4 14.4 1.0
ND2 A:ASN189 4.4 16.5 1.0
O1G A:ANP406 4.5 18.8 1.0
PA A:ANP406 4.5 12.8 1.0
O2B A:ANP406 4.5 12.6 1.0
CA A:GLY19 4.5 13.9 1.0
CG A:ASP17 4.7 15.7 1.0
OD1 A:ASN189 4.9 21.0 1.0
CE A:LYS24 4.9 12.5 1.0
CH3 A:ACT404 5.0 26.9 1.0
CD A:GLU138 5.0 26.4 1.0

Reference:

R.Tangallapally, A.Edwards, C.Subramanian, L.K.Sharma, M.Yun, S.W.White, S.Jackowski, C.O.Rock, R.E.Lee. Discovery of Hpank Activators with Improved Pharmacological Properties To Be Published.
Page generated: Thu Oct 3 09:54:14 2024

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