Magnesium in PDB 7uel: Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Antibody Response

Protein crystallography data

The structure of Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Antibody Response, PDB code: 7uel was solved by D.B.Langley, D.Christ, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.68 / 1.90
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 73.54, 71.37, 95.821, 90, 104.94, 90
R / Rfree (%) 16.9 / 21.6

Other elements in 7uel:

The structure of Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Antibody Response also contains other interesting chemical elements:

Chlorine (Cl) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Antibody Response (pdb code 7uel). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Antibody Response, PDB code: 7uel:

Magnesium binding site 1 out of 1 in 7uel

Go back to Magnesium Binding Sites List in 7uel
Magnesium binding site 1 out of 1 in the Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Antibody Response


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Antibody Response within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg305

b:27.3
occ:1.00
OE1 L:GLU83 2.1 21.7 1.0
O L:HOH424 2.2 18.9 1.0
O L:HOH547 2.3 24.3 1.0
O L:VAL106 2.3 17.1 1.0
O L:HOH569 2.5 35.1 1.0
O L:HOH564 2.9 35.1 1.0
CD L:GLU83 3.1 20.3 1.0
C L:VAL106 3.4 21.0 1.0
OE2 L:GLU83 3.6 22.6 1.0
N L:VAL106 3.8 17.6 1.0
CA L:VAL106 4.0 19.1 1.0
OH L:TYR140 4.0 17.8 1.0
O L:HOH413 4.0 19.7 1.0
CB L:VAL106 4.0 18.4 1.0
CG L:GLU83 4.3 16.0 1.0
CB L:GLU83 4.3 14.7 1.0
O L:HOH584 4.3 58.5 1.0
O L:HOH538 4.4 24.4 1.0
CG2 L:THR105 4.4 19.0 1.0
O L:HOH462 4.5 48.6 1.0
O L:HOH595 4.6 28.4 0.5
N L:GLY107 4.6 19.8 1.0
N L:LEU106A 4.6 19.8 1.0
CL L:CL302 4.6 29.7 1.0
C L:LEU106A 4.8 17.2 1.0
CG1 L:VAL106 4.8 19.6 1.0
C L:THR105 4.9 20.9 1.0
CA L:LEU106A 4.9 19.5 1.0

Reference:

D.B.Langley, P.Schofield, D.Nevoltris, J.Jackson, K.J.L.Jackson, T.J.Peters, M.Burk, J.M.Matthews, A.Basten, C.C.Goodnow, S.Van Nunen, J.H.Reed, D.Christ. Genetic and Structural Basis of the Human Anti-Alpha-Galactosyl Antibody Response. Proc.Natl.Acad.Sci.Usa V. 119 12119 2022.
ISSN: ESSN 1091-6490
PubMed: 35867757
DOI: 10.1073/PNAS.2123212119
Page generated: Thu Oct 3 09:54:32 2024

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