Magnesium in PDB 7uo9: Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State

Enzymatic activity of Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State

All present enzymatic activity of Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State:
2.7.7.48;

Other elements in 7uo9:

The structure of Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State (pdb code 7uo9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State, PDB code: 7uo9:

Magnesium binding site 1 out of 1 in 7uo9

Go back to Magnesium Binding Sites List in 7uo9
Magnesium binding site 1 out of 1 in the Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre- Catalytic State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1003

b:23.4
occ:1.00
O1B A:UTP1004 1.8 24.8 1.0
OD1 A:ASP618 1.9 21.8 1.0
OD2 A:ASP760 2.3 20.8 1.0
O A:TYR619 2.6 20.3 1.0
O3G A:UTP1004 2.7 24.8 1.0
O2A A:UTP1004 2.8 24.8 1.0
CG A:ASP618 3.0 21.8 1.0
PB A:UTP1004 3.0 24.8 1.0
O3A A:UTP1004 3.4 24.8 1.0
CG A:ASP760 3.5 20.8 1.0
OD2 A:ASP618 3.5 21.8 1.0
HZ1 A:LYS798 3.5 24.1 1.0
O3B A:UTP1004 3.6 24.8 1.0
PA A:UTP1004 3.7 24.8 1.0
PG A:UTP1004 3.7 24.8 1.0
C A:TYR619 3.8 20.3 1.0
H A:TYR619 4.0 20.3 1.0
N A:TYR619 4.0 20.3 1.0
OD1 A:ASP760 4.1 20.8 1.0
C A:ASP618 4.2 21.8 1.0
O A:PRO620 4.2 22.8 1.0
O2G A:UTP1004 4.2 24.8 1.0
C5' A:UTP1004 4.3 24.8 1.0
CB A:ASP618 4.3 21.8 1.0
O2B A:UTP1004 4.3 24.8 1.0
HB2 A:ASP760 4.4 20.8 1.0
HB2 A:CYS622 4.4 23.7 1.0
NZ A:LYS798 4.4 24.1 1.0
HB2 A:TYR619 4.4 20.3 1.0
H A:CYS622 4.4 23.7 1.0
CA A:TYR619 4.4 20.3 1.0
HE2 A:LYS798 4.5 24.1 1.0
CB A:ASP760 4.6 20.8 1.0
O5' A:UTP1004 4.6 24.8 1.0
HB3 A:ASP618 4.6 21.8 1.0
O A:ASP618 4.6 21.8 1.0
HA A:ASP618 4.6 21.8 1.0
C A:PRO620 4.7 22.8 1.0
CA A:ASP618 4.7 21.8 1.0
HA A:PRO620 4.7 22.8 1.0
HE3 A:LYS798 4.7 24.1 1.0
HZ3 A:LYS798 4.8 24.1 1.0
N A:PRO620 4.8 22.8 1.0
CE A:LYS798 4.8 24.1 1.0
O P:HOH109 4.8 25.8 1.0
O1A A:UTP1004 4.9 24.8 1.0
HZ2 A:LYS798 4.9 24.1 1.0
CA A:PRO620 4.9 22.8 1.0
HB3 A:ASP760 5.0 20.8 1.0
CB A:TYR619 5.0 20.3 1.0
O1G A:UTP1004 5.0 24.8 1.0

Reference:

B.F.Malone, S.A.Darst. Sars-Cov-2 Replication-Transcription Complex Bound to Utp, in A Pre-Catalytic State To Be Published.
Page generated: Thu Apr 6 23:56:07 2023

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