Magnesium in PDB 7vfp: Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp

Enzymatic activity of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp

All present enzymatic activity of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp:
7.6.2.5;

Other elements in 7vfp:

The structure of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp also contains other interesting chemical elements:

Iron

(Fe)

1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp (pdb code 7vfp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp, PDB code: 7vfp:

Magnesium binding site 1 out of 1 in 7vfp

Go back to

Magnesium Binding Sites List in 7vfp

Magnesium binding site 1 out of 1 in the Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
E:Mg300 b:163.1 occ:1.00	O2B	E:ATP301	1.9	172.2	1.0
	OG1	E:THR41	2.0	140.3	1.0
	O	E:HOH402	2.0	145.6	1.0
	O	E:HOH401	2.1	167.0	1.0
	O3G	E:ATP301	2.1	172.2	1.0
	NE2	E:HIS81	2.1	133.5	1.0
	CD2	E:HIS81	2.8	133.5	1.0
	PB	E:ATP301	3.1	172.2	1.0
	CB	E:THR41	3.1	140.3	1.0
	PG	E:ATP301	3.2	172.2	1.0
	CE1	E:HIS81	3.3	133.5	1.0
	O3B	E:ATP301	3.5	172.2	1.0
	O1G	E:ATP301	3.5	172.2	1.0
	O1B	E:ATP301	3.8	172.2	1.0
	CG2	E:THR41	3.8	140.3	1.0
	CG	E:HIS81	4.1	133.5	1.0
	ND1	E:HIS81	4.3	133.5	1.0
	CA	E:THR41	4.3	140.3	1.0
	O3A	E:ATP301	4.4	172.2	1.0
	OD2	E:ASP151	4.5	123.1	1.0
	N	E:THR41	4.5	140.3	1.0
	O2G	E:ATP301	4.5	172.2	1.0
	O2A	E:ATP301	4.6	172.2	1.0
	PA	E:ATP301	4.8	172.2	1.0
	O1A	E:ATP301	4.9	172.2	1.0
	OD1	E:ASP151	4.9	123.1	1.0
	CG	E:LYS40	5.0	139.4	1.0

Reference:

J.Li, W.Zheng, M.Gu, L.Han, Y.Luo, K.Yu, M.Sun, Y.Zong, X.Ma, B.Liu, E.P.Lowder, D.L.Mendez, R.G.Kranz, K.Zhang, J.Zhu. Structures of the Ccmabcd Heme Release Complex at Multiple States. Nat Commun V. 13 6422 2022.
ISSN: ESSN 2041-1723
PubMed: 36307425
DOI: 10.1038/S41467-022-34136-5

Page generated: Thu Oct 3 10:27:42 2024

Last articles

Na in 7Q78
Na in 7Q77
Na in 7Q76
Na in 7Q6Q
Na in 7Q75
Na in 7Q5F
Na in 7Q47
Na in 7Q3Z
Na in 7Q5E
Na in 7Q36

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy