Magnesium in PDB 7vwz: Cryo-Em Structure of Rob-Dependent Transcription Activation Complex in A Unique Conformation

All present enzymatic activity of Cryo-Em Structure of Rob-Dependent Transcription Activation Complex in A Unique Conformation:
2.7.7.6;

The structure of Cryo-Em Structure of Rob-Dependent Transcription Activation Complex in A Unique Conformation also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Magnesium atom in the Cryo-Em Structure of Rob-Dependent Transcription Activation Complex in A Unique Conformation (pdb code 7vwz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Rob-Dependent Transcription Activation Complex in A Unique Conformation, PDB code: 7vwz:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Rob-Dependent Transcription Activation Complex in A Unique Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Rob-Dependent Transcription Activation Complex in A Unique Conformation within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1503 b:82.1 occ:1.00 OD1 D:ASP462 2.7 71.7 1.0 OD1 D:ASP460 2.7 84.4 1.0 OD2 D:ASP462 2.7 71.7 1.0 CG D:ASP462 2.8 71.7 1.0 OD2 D:ASP464 3.1 73.6 1.0 CG D:ASP460 3.6 84.4 1.0 CB D:ASP462 3.9 71.7 1.0 OD2 D:ASP460 4.0 84.4 1.0 CG D:ASP464 4.0 73.6 1.0 O D:ASP460 4.2 84.4 1.0 OD1 D:ASP464 4.4 73.6 1.0 NZ C:LYS1073 4.5 60.9 1.0 N D:ASP460 4.6 84.4 1.0 C D:ASP460 4.7 84.4 1.0 N D:ASP462 4.7 71.7 1.0 CB D:ASP460 4.9 84.4 1.0 CA D:ASP462 4.9 71.7 1.0 CA D:ASP460 5.0 84.4 1.0

J.Shi, F.Wang, F.Li, L.Wang, Y.Xiong, A.Wen, Y.Jin, S.Jin, F.Gao, Z.Feng, J.Li, Y.Zhang, Z.Shang, S.Wang, Y.Feng, W.Lin. Structural Basis of Transcription Activation By Rob, A Pleiotropic Arac/Xyls Family Regulator. Nucleic Acids Res. V. 50 5974 2022.
ISSN: ESSN 1362-4962
PubMed: 35641097
DOI: 10.1093/NAR/GKAC433