Magnesium in PDB 7w4f: Active State Ci From Q1-Nadh Dataset, Subclass 4

Enzymatic activity of Active State Ci From Q1-Nadh Dataset, Subclass 4

All present enzymatic activity of Active State Ci From Q1-Nadh Dataset, Subclass 4:
7.1.1.2;

Other elements in 7w4f:

The structure of Active State Ci From Q1-Nadh Dataset, Subclass 4 also contains other interesting chemical elements:

Iron (Fe) 28 atoms
Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Active State Ci From Q1-Nadh Dataset, Subclass 4 (pdb code 7w4f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Active State Ci From Q1-Nadh Dataset, Subclass 4, PDB code: 7w4f:

Magnesium binding site 1 out of 1 in 7w4f

Go back to Magnesium Binding Sites List in 7w4f
Magnesium binding site 1 out of 1 in the Active State Ci From Q1-Nadh Dataset, Subclass 4


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Active State Ci From Q1-Nadh Dataset, Subclass 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg804

b:0.0
occ:1.00
O M:VAL228 2.5 19.4 1.0
O M:CYS226 2.8 21.1 1.0
O M:LEU231 2.8 14.2 1.0
O M:ILE223 2.9 27.5 1.0
OE1 M:GLN133 3.0 15.3 1.0
CB M:CYS226 3.5 8.4 1.0
C M:VAL228 3.7 9.8 1.0
C M:CYS226 3.7 9.8 1.0
CD M:GLN133 3.8 11.5 1.0
C M:LEU231 4.0 10.4 1.0
SG M:CYS226 4.1 14.2 1.0
C M:ILE223 4.1 15.0 1.0
CA M:CYS226 4.1 7.8 1.0
N M:VAL228 4.2 5.1 1.0
NE2 M:GLN133 4.3 15.6 1.0
CA M:GLY229 4.5 1.0 1.0
N M:GLY229 4.5 0.0 1.0
N M:CYS226 4.5 3.8 1.0
CA M:VAL228 4.6 6.0 1.0
CG2 M:ILE223 4.6 12.4 1.0
CA M:ILE223 4.7 3.8 1.0
C M:PRO227 4.7 8.4 1.0
N M:LEU231 4.7 9.2 1.0
N M:PRO227 4.7 12.0 1.0
CG2 M:THR232 4.8 9.3 1.0
CA M:LEU231 4.8 8.5 1.0
CE L:MET87 4.8 21.0 1.0
CG M:GLN133 4.9 9.1 1.0
CB M:LEU231 5.0 6.5 1.0
N M:THR232 5.0 6.2 1.0

Reference:

J.Gu, T.Liu, R.Guo, L.Zhang, M.Yang. The Coupling Mechanism of Mammalian Mitochondrial Complex I Nat.Struct.Mol.Biol. V. 29 172 2022.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-022-00722-W
Page generated: Fri Apr 7 01:32:20 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy