Magnesium in PDB 7wrx: Structure of Deinococcus Radiodurans Hera-Adp Complex

The structure of Structure of Deinococcus Radiodurans Hera-Adp Complex, PDB code: 7wrx was solved by K.Cheng, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 3.40
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	106.011, 202.869, 411.852, 90, 90, 90
R / Rfree (%)	27.6 / 29.1

The binding sites of Magnesium atom in the Structure of Deinococcus Radiodurans Hera-Adp Complex (pdb code 7wrx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Deinococcus Radiodurans Hera-Adp Complex, PDB code: 7wrx:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of Deinococcus Radiodurans Hera-Adp Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Deinococcus Radiodurans Hera-Adp Complex within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg1000 b:65.9 occ:1.00 OD2 H:ASP487 2.2 67.8 1.0 NZ H:LYS217 2.3 64.9 1.0 O1B H:ADP1001 2.4 65.4 1.0 OG1 H:THR176 2.4 65.7 1.0 CE H:LYS217 3.3 67.3 1.0 CG H:ASP487 3.4 66.9 1.0 CB H:THR176 3.4 62.2 1.0 PB H:ADP1001 3.7 65.3 1.0 O3A H:ADP1001 3.7 65.3 1.0 CD H:LYS217 3.9 68.1 1.0 CG2 H:THR176 4.0 60.9 1.0 OD1 H:ASP487 4.2 67.0 1.0 CB H:ASP487 4.4 64.9 1.0 O1A H:ADP1001 4.4 65.2 1.0 PA H:ADP1001 4.4 65.1 1.0 O2B H:ADP1001 4.5 65.4 1.0 O2A H:ADP1001 4.7 64.8 1.0 O3B H:ADP1001 4.7 64.9 1.0 CA H:THR176 4.7 64.1 1.0 N H:THR176 4.9 62.0 1.0

Magnesium binding site 2 out of 2 in the Structure of Deinococcus Radiodurans Hera-Adp Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Deinococcus Radiodurans Hera-Adp Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1000 b:71.6 occ:1.00 OD2 D:ASP487 1.7 76.0 1.0 OG1 D:THR176 2.0 73.8 1.0 O3B D:ADP1001 2.2 75.6 1.0 CG D:ASP487 2.9 75.0 1.0 O1B D:ADP1001 3.0 75.0 1.0 PB D:ADP1001 3.1 75.2 1.0 CB D:THR176 3.1 70.6 1.0 OD1 D:ASP487 3.4 75.0 1.0 O2B D:ADP1001 3.9 75.0 1.0 CB D:ASP487 4.1 73.1 1.0 CG2 D:THR176 4.1 69.3 1.0 N D:THR176 4.1 70.5 1.0 CA D:THR176 4.2 72.7 1.0 O3A D:ADP1001 4.3 75.1 1.0 O2A D:ADP1001 4.5 75.3 1.0 NZ D:LYS217 4.8 74.1 1.0 PA D:ADP1001 4.8 75.4 1.0 CG D:LYS175 4.8 73.7 1.0 O1A D:ADP1001 4.9 75.6 1.0

K.Cheng, K.Cheng. N/A N/A.