Magnesium in PDB 7wua: Crystal Structures of FADD32 From Corynebacterium Diphtheriae

The structure of Crystal Structures of FADD32 From Corynebacterium Diphtheriae, PDB code: 7wua was solved by X.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.10 / 2.00
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	108.647, 97.535, 142.043, 90, 95.93, 90
R / Rfree (%)	18.5 / 22.4

The binding sites of Magnesium atom in the Crystal Structures of FADD32 From Corynebacterium Diphtheriae (pdb code 7wua). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structures of FADD32 From Corynebacterium Diphtheriae, PDB code: 7wua:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structures of FADD32 From Corynebacterium Diphtheriae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structures of FADD32 From Corynebacterium Diphtheriae within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg703 b:30.0 occ:1.00 O A:HOH924 1.8 23.6 1.0 O A:HOH956 2.0 24.0 1.0 O A:HOH1001 2.0 18.6 1.0 O3G A:ANP701 2.2 28.1 1.0 O1B A:ANP701 2.3 21.1 1.0 O A:HOH895 2.4 20.0 1.0 PG A:ANP701 3.3 31.5 1.0 O A:HOH1135 3.4 34.1 1.0 O2G A:ANP701 3.5 30.8 1.0 PB A:ANP701 3.5 27.7 1.0 O A:HOH849 3.7 26.9 1.0 O A:HOH1185 3.8 32.9 1.0 N3B A:ANP701 3.9 24.6 1.0 OE2 A:GLU356 4.1 18.6 1.0 NH1 A:ARG492 4.2 23.9 1.0 O3A A:ANP701 4.2 29.3 1.0 O A:HOH1192 4.2 23.7 1.0 HO3' A:ANP701 4.2 16.6 1.0 O A:HOH1010 4.3 20.3 1.0 H5'1 A:ANP701 4.3 21.1 1.0 OE1 A:GLU356 4.4 13.6 1.0 H4' A:ANP701 4.4 22.3 1.0 O1G A:ANP701 4.5 32.4 1.0 CD A:GLU356 4.6 21.6 1.0 O3' A:ANP701 4.7 13.9 1.0 O2B A:ANP701 4.7 21.7 1.0 O2A A:ANP701 4.7 16.3 1.0 HNB1 A:ANP701 4.8 29.5 1.0 PA A:ANP701 4.9 24.6 1.0

Magnesium binding site 2 out of 2 in the Crystal Structures of FADD32 From Corynebacterium Diphtheriae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structures of FADD32 From Corynebacterium Diphtheriae within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg703 b:30.0 occ:1.00 O B:HOH1035 2.0 28.4 1.0 O B:HOH961 2.2 20.5 1.0 O B:HOH929 2.5 22.3 1.0 O1B B:ANP701 2.6 66.3 1.0 O3G B:ANP701 2.6 28.1 1.0 O B:HOH865 2.6 25.3 1.0 O1G B:ANP701 3.2 51.2 1.0 PG B:ANP701 3.3 40.1 1.0 PB B:ANP701 3.4 45.2 1.0 N3B B:ANP701 3.6 39.2 1.0 NH1 B:ARG492 3.7 27.1 1.0 O3A B:ANP701 3.9 44.8 1.0 H4' B:ANP701 4.1 24.4 1.0 H5'1 B:ANP701 4.3 22.2 1.0 O B:HOH1121 4.3 30.9 1.0 HNB1 B:ANP701 4.4 47.0 1.0 O2B B:ANP701 4.4 43.0 1.0 O B:HOH946 4.5 20.1 1.0 HO3' B:ANP701 4.5 21.6 1.0 OE2 B:GLU356 4.5 15.7 1.0 O2A B:ANP701 4.6 24.0 1.0 O2G B:ANP701 4.6 48.7 1.0 O3' B:ANP701 4.6 18.0 1.0 OE1 B:GLU356 4.7 15.4 1.0 PA B:ANP701 4.7 25.2 1.0 CZ B:ARG492 4.8 35.5 1.0 C4' B:ANP701 4.8 20.4 1.0 C5' B:ANP701 4.9 18.5 1.0 O5' B:ANP701 5.0 20.2 1.0 NH1 B:ARG594 5.0 28.6 1.0

R.Chen, J.Yuan, X.Shi, W.Tang. Crystal Structures of FADD32 and PKS13-Acp Domain From Corynebacterium Diphtheriae Biochem Biophys Res Commun V. 590 152 2022.
ISSN: ISSN 0006-291X