Magnesium in PDB 7xml: Cryo-Em Structure of Peip-BS_ENOLASE Complex

All present enzymatic activity of Cryo-Em Structure of Peip-BS_ENOLASE Complex:
4.2.1.11;

The binding sites of Magnesium atom in the Cryo-Em Structure of Peip-BS_ENOLASE Complex (pdb code 7xml). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of Peip-BS_ENOLASE Complex, PDB code: 7xml:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryo-Em Structure of Peip-BS_ENOLASE Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Peip-BS_ENOLASE Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:30.0 occ:1.00 NZ A:LYS390 3.0 48.8 1.0 O A:HIS367 3.6 70.8 1.0 OG A:SER366 3.7 52.8 1.0 OE2 A:GLU287 3.7 81.0 1.0 OD2 A:ASP242 4.0 83.3 1.0 CE A:LYS390 4.3 48.8 1.0 CD A:LYS390 4.3 48.8 1.0 OG A:SER369 4.4 100.4 1.0 CD A:GLU287 4.5 81.0 1.0 OE1 A:GLU287 4.5 81.0 1.0 C A:HIS367 4.8 70.8 1.0 CD2 A:LEU337 5.0 54.9 1.0 CB A:SER366 5.0 52.8 1.0

Magnesium binding site 2 out of 2 in the Cryo-Em Structure of Peip-BS_ENOLASE Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Peip-BS_ENOLASE Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:30.0 occ:1.00 OE1 A:GLU287 2.9 81.0 1.0 CE A:MET146 3.4 47.9 1.0 O A:MET241 3.6 73.9 1.0 CB A:GLU287 3.7 81.0 1.0 CD A:GLU287 3.9 81.0 1.0 OG A:SER285 4.0 65.7 1.0 SD A:MET166 4.3 62.5 1.0 CG A:GLU287 4.4 81.0 1.0 CG2 A:VAL312 4.5 73.2 1.0 NZ A:LYS390 4.5 48.8 1.0 CE A:MET166 4.5 62.5 1.0 C A:MET241 4.6 73.9 1.0 CE A:LYS390 4.6 48.8 1.0 CB A:ALA240 4.8 62.0 1.0 CA A:GLU287 4.8 81.0 1.0 N A:GLU287 4.8 81.0 1.0 OE2 A:GLU287 4.9 81.0 1.0 SD A:MET146 4.9 47.9 1.0 CB A:SER285 4.9 65.7 1.0

K.Zhang, S.Li, Y.Wang, Z.Wang, N.Mulvenna, H.Yang, P.Zhang, H.Chen, Y.Li, H.Wang, Y.Gao, S.Wigneshweraraj, S.Matthews, K.Zhang, B.Liu. Bacteriophage Protein Peip Is A Potent Bacillus Subtilis Enolase Inhibitor. Cell Rep V. 40 11026 2022.
ISSN: ESSN 2211-1247
PubMed: 35793626
DOI: 10.1016/J.CELREP.2022.111026